African Journal of
Agricultural Research

  • Abbreviation: Afr. J. Agric. Res.
  • Language: English
  • ISSN: 1991-637X
  • DOI: 10.5897/AJAR
  • Start Year: 2006
  • Published Articles: 6925

Full Length Research Paper

Molecular cloning and characterization of the HDR gene involved in the methyl-erythritol phosphate (MEP) pathway from sweet potato [Ipomoea batatas (L.) Lam]

Guijun Wang1, Min Chen2, Xiaoqiang Liu1, Chunxian Yang1, Lingjiang Zeng1, Fanyu Fu1, Xiaozhong Lan3 and Zhihua Liao
   1Key Laboratory of Eco-environments in Three Gorges Reservoir Region (Ministry of Education), Chongqing Sweet potato Research Center, School of Life Sciences, Southwest University, Chongqing 400715, People’s Republic of China. 2Key Laboratory of Eco-environments in Three Gorges Reservoir Region (Ministry of Education), College of Pharmaceutical Sciences, Southwest University, Chongqing 400715, People’s Republic of China. 3Tibet Agricultural and Animal Husbandry College, Nyingchi of Tibet 860000, People’s Republic of China.  
Email: [email protected] or [email protected]

  •  Accepted: 13 October 2011
  •  Published: 31 January 2012

Abstract

 

1-Hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase (HDR, EC 1.17.1.2) catalyses the last committed step of MEP pathway, which provides precursors for biosynthesis of isoprenoids in plant. This research is the first report of cloning full-length cDNA encoding HDR from sweet potato [Ipomoea batatas (L.) Lam], which is designated as IbHDR (Genbank Accession Number: HQ596402). The full length of IbHDR was 1725 bp, containing a 1383 bp open reading frame which encoded 461 putative amino acids. The deduced IbHDR protein was predicted to possess a chloroplast transit peptide at the N-terminal and showed extensive homology with HDRs from other plant species. Quantitative PCR revealed that transcription level of IbHDR was highest in tender leaves while lowest in old leaves. Accumulation analysis indicated that carotenoids content was highest in old leaves, followed by tender leaves. Other tissues demonstrated similar carotenoids accumulation which was approximate 7-fold lower than that in old leaves. Cloning and characterization of IbHDR gene will facilitate the further understanding of the function of IbHDR at the genetic level. This report also will be helpful to elevate carotenoid content in sweet potato cultivators by applying metabolic engineering strategy.

 

Key words: Ipomoea batatas, 1-Hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase, transcription pattern, carotenoids.