African Journal of
Biotechnology

  • Abbreviation: Afr. J. Biotechnol.
  • Language: English
  • ISSN: 1684-5315
  • DOI: 10.5897/AJB
  • Start Year: 2002
  • Published Articles: 12500

Full Length Research Paper

Polymerase chain reaction (PCR) detection of the predominant microcystin-producing genotype of cyanobacteria in Mozambican lakes

Olívia Pedro1,2,4*, Dacia Correia2,4, Elisabeth Lie1, Janneche U. Skåre1,3, Joelma Leão4, Luís Neves2,4, Morten Sandvik3 and Knut G. Berdal3
1Norwegian School of Veterinary Science, P.B. 8146 Dep, NO-0033 Oslo, Norway. 2Veterinary Faculty of the Eduardo Mondlane University, Av. de Mozambique km 1.5, P.B. 257 Maputo, Mozambique. 3Norwegian Veterinary Institute, P.O. Box 750, Sentrum, 0106, Oslo, Norway. 4Centro de Biotecnologia da Universidade Eduardo Mondlane, Av. de Mozambique km 1.5, P.B. 257 Maputo, Mozambique.
Email: [email protected], [email protected]

  •  Accepted: 04 November 2011
  •  Published: 21 December 2011

Abstract

Mozambique is a developing country with a wide range of aquatic ecosystems. Given the limited resources of the country, problems of aquatic pollution have not received the required consideration. The aim of the present study was to assess the presence of microcystins (MCs) and identify the genotypes of MC-producing cyanobacteria in Mozambique. Polymerase chain reaction (PCR) based detection methods were used to analyze samples from three study freshwater bodies which are used as sources of drinking water. The occurrence of cyanobacterial toxic genes in Nhambavale lake and Chòkwé irrigation channels is reported based on general and genus-specific PCR amplification of the cpcB-cpcA, mcyA and mcyB genes. The genera of MC-producing cyanobacteria were differentiated by restriction fragment length polymorphism (RFLPs) analysis. Microcystis was identified as the predominant potential MC-producing genera. Analysis for MCs in passive sampling devices (PSDs) by liquid chromatography-mass spectroscopy (LC-MS) revealed 3 MC variants (MC-LR, -YR and -RR) at concentrations of 2.1 to 159.4 ng/g of PSD. MC-LR was the dominant variant which was detected in all study sites. This study has established that Microcystis was the predominant genotype and it may be the genus responsible for the production of the MCs detected in water. Results from this study showed that the RFLPs method was able to differentiate MC-producing from the non- MC-producing cyanobacteria in Mozambique.

 

Key words:  Cyanobacteria, microcystins, Mozambique, PCR, RFLP.

Abbreviation

MC, MicrocystinsPCR, polymerase chain reaction; PSDs, passive sampling devicesLC-MS, liquid chromatography-mass spectroscopyRFLPs,restriction fragment length polymorphism.