African Journal of
Biotechnology

  • Abbreviation: Afr. J. Biotechnol.
  • Language: English
  • ISSN: 1684-5315
  • DOI: 10.5897/AJB
  • Start Year: 2002
  • Published Articles: 12508

Full Length Research Paper

Sequencing and phylogenetic analysis of Herpes simplex virus type-2 gG gene in Iran

  Mehrnoush Eskandari1*, Hassan Momtaz2, Sharareh Moghim3 and Mahboobeh Madani4  
  1Graduated of Master of Science of Microbiology, Falavarjan Branch, Islamic Azad University, Falavarjan-Iran 2Department of Microbiology, Falavarjan Branch, Islamic Azad University, Falavarjan, Iran. 3Department of Microbiology, Shahrekord Branch, Islamic Azad University, Shahrekord, Iran. 4Department of Microbiology, Isfahan Medical University, Isfahan, Iran.
Email: [email protected]

  •  Accepted: 12 October 2011
  •  Published: 19 January 2012

Abstract

 

Herpes simplex virus type-2 (HSV-2) is the main cause of genital herpes infection. Its prevalence is increasing worldwide and varies widely with generally higher rate in developing than developed countries and urban than rural areas. Identification of glycoprotein G (gG-2) from HSV-2 as type-specific antigen have been helpful in development of reliable and accurate type-specific serological methods. For determination of the genetic relationship of HSV-2 glycoprotein G gene (gG) in Iran with those in other countries, DNA fragment of 1100 bp corresponding to gG from sixHSV-2 strains have been isolated from human infected sera samples in Iran, it was amplified in PCR system and was sequenced for determining nucleotide sequence and compared with identified nucleotide sequence of this gene in other countries. The results indicated the presence of 0.3 to 9.5% variability in gG gene in six sequenced samples in Iran. A comparison made on gG gene in Iran with other countries show 0.3 to 14.3% variability in this gene. The greatest sequence similarity exists between sequences of gG in Iran and Sweden (EU018098 and EU018128) with a sequence similarity of 99.7% and the least relationship exists between sequences of gG gene ofHSV-2 in Iran and USA (DQ236139) with a similarity of 85.7%.

 

Key words: Herpes simplex virus type-2gG gene, phylogenetic relationship, Iran.