African Journal of
Biotechnology

  • Abbreviation: Afr. J. Biotechnol.
  • Language: English
  • ISSN: 1684-5315
  • DOI: 10.5897/AJB
  • Start Year: 2002
  • Published Articles: 12481

Full Length Research Paper

Evaluation of interspecific DNA variability in poplars using AFLP and SSR markers

Orlović Saša1*, Galović Vladislava1, Zorić Miroslav2, Kovačević Branislav1, Pilipović Andrej1 and Zoran Galic1
  1University of Novi Sad, Institute of Lowland Forestry and Environment, Antona ÄŒehova 13, 21000 Novi Sad, Serbia. 2Institute of Field Crop Science, Faculty of Agriculture, University of Belgrade, Nemanjina 6, 11080 Belgrade-Zemun, Serbia.
Email: [email protected]

  •  Accepted: 10 September 2009
  •  Published: 19 October 2009

Abstract

 

The objective of this paper was to examine interspecific DNA variation in poplars using AFLP and SSR markers. The AFLP and SSR markers polymorphism and its power of discrimination were determined within 13 genotypes of different genetic background (clones, cultivars, hybrids) of two sections (Aigeiros and Tacamahaca) of genus Populus. Twelve sets of PTR and four sets of WPMS microsatellite primers as well as 6 AFLP primer combinations were used in this study. SSR and AFLP markers revealed high power of discrimination, 0.81 and 0.92 respectively. Results obtained using SSR data showed a clear separation of three major clusters, while four major clusters were obtained using AFLP data. Both markers crearly separated two distinct clusters, one included Populus nigra and the otherPopulus deltoides genotypes. According to both markers, different genetic background were revealed between two clones of Populus trichocarpa. When evaluating polymorphisms within genotypes of interest, microsatellite and AFLP DNA markers proved to be a useful tool for distinguishing genetic background of tree clones, cultivars and hybrid genotypes thus grouping them according to their genetic dissimilarity. The results presented in this study could be of significant interest in poplar breeding programs and could also be used as a valuable annex in new bred clones registration process.

 

Key words: Poplar, AFLP and SSR markers, genotyping, polymorphisms.