African Journal of
Biotechnology

  • Abbreviation: Afr. J. Biotechnol.
  • Language: English
  • ISSN: 1684-5315
  • DOI: 10.5897/AJB
  • Start Year: 2002
  • Published Articles: 12488

Full Length Research Paper

Genetic structure and diversity of the neem germplasm bank from Brazil Northeast

Ana Veruska Cruz da Silva1, Allívia Rouse Carregosa Rabbani2, Camila Santos Almeida2 and Débora Clivati3
1Embrapa Coastal Tablelands. Av. Beira-mar, 3250. Aracaju, Sergipe, 49025-040, Brazil. 2Universidade Federal de Sergipe. Laboratory of Genaplant. São Cristovão, Sergipe, 49000-000, Brazil. 3Universidade de Mogi das Cruzes. Laboratory of Plant Systematics, Mogi das Cruzes, São Paulo, 08780-911, Brazil.  
Email: [email protected]

  •  Accepted: 10 May 2013
  •  Published: 15 May 2013

Abstract

Neem (Azadirachta indica A. Juss) is a tree species with known value to agriculture. Our aim was to evaluate, using random amplified polymorphic DNA (RAPD) markers, the genetic diversity of 54 accessions from Germplasm Bank (GBN) of Embrapa Coastal Tablelands (Sergipe, Brazil). The acces-sions were analyzed using a model-based Bayesian procedure (Structure), molecular variance analysis (AMOVA) and Jaccard coefficient was estimated. The marker data indicated that GBN have three independent genetic groups, confirmed by genetic structure and genetic variability, enabling the formulation of appropriate strategies for management and use of GBN.

 

Key words: Azadirachta indica, Azadirachta excelsa, genetic resource, variability

Abbreviation

GBN, Neem Germplasm Bank; RAPD, random amplified polymorphic DNA; PCR, polymerase chain reaction; PIC, polymorphic information content; MI, marker index; RPP, reconstructed panmictic populations; AFLP,amplified fragment length polymorphism; AMOVA, molecular variance analysis.