African Journal of
Biotechnology

  • Abbreviation: Afr. J. Biotechnol.
  • Language: English
  • ISSN: 1684-5315
  • DOI: 10.5897/AJB
  • Start Year: 2002
  • Published Articles: 12487

Full Length Research Paper

SSR markers reveal diversity in Guinea yam (Dioscorea cayenensis/D. rotundata) core set

J. E. Obidiegwu1,2,3*, M. Kolesnikova-Allen4, E. E. Ene-obong3, C. O. Muoneke3 and R. Asiedu1
  1International Institute of Tropical Agriculture, Carolyn House, 26 Dingwall Road, Croydon CR9 3EE, UK. 2National Root Crops Research Institute, Umudike, P. M. B. 7006, Umuahia, Abia State, Nigeria. 3Department of Agronomy, Michael Okpara University of Agriculture, Umudike, Abia State, Nigeria. 4Biotechnology Unit, Tun Abdul Razak Research Centre Brickendonbury Hertford, UK SG13 8NL.
Email: [email protected]

  •  Accepted: 23 February 2009
  •  Published: 17 June 2009

Abstract

 

The genetic diversity of 219 accessions of Guinea yam germplasm from Benin, Congo, Côte d’ Ivoire, Equatorial Guinea, Gabon, Ghana, Nigeria, Sierra Leone and Togo was accessed using 15 microsatellite loci. High diversity of 0.677 was found among the accessions. An allelic average of 8.06 and polymorphic information content (PIC) value of 0.65 was observed for the markers. The observed heterozygosity value of 0.563 suggests that spontaneous hybridization must have contributed to the ancestry of some of the accessions and improvement by farmers must have been far more often by selection of somatic mutants. The twenty distinct cluster groups generated by the radial phylogram shows that Dioscorea cayenensisand D. rotundata are distinct species with intermediate hybrid forms. There was no relationship between relatedness of the accessions and their geographical area of origin. This study contributes to an increased understanding of the genetic organisation of the core germplasm.

 

Key words: Core germplasm, Dioscorea cayenensis/D. rotundata, genetic diversity, microsatellite.