African Journal of
Biotechnology

  • Abbreviation: Afr. J. Biotechnol.
  • Language: English
  • ISSN: 1684-5315
  • DOI: 10.5897/AJB
  • Start Year: 2002
  • Published Articles: 12487

Full Length Research Paper

Genetic diversity of faba bean (Vicia faba L.) populations revealed by sequence specific amplified polymorphism (SSAP) markers

  Ali Ouji1*, Safia El Bok1, Naeem H. Syed2, Raoudha Abdellaoui3, Mustapha Rouaissi4, Andrew J. Flavell2 and Mohamed El Gazzah1
  1Laboratoire de génétique des populations et Ressources Biologiques, faculté des Sciences de Tunis- Campus universitaire 2092- Tunisie. 2Laboratoire d’Ecologie Pastorale, Institut des Régions Arides, Route de Djerba Km 22.5, 4119, Médenine, Tunisie. 3Plant Research Unit, University of Dundee at SCRI, Invergowrie, Dundee, DD25DA, UK. 4Laboratoire de Biotechnologie et de Physiologie végétale, INRA Tunis, rue Hedi karray2049, Ariana, Tunisie.  
Email: [email protected]

  •  Accepted: 13 December 2011
  •  Published: 31 January 2012

Abstract

 

This study used sequence specifc amplifcation polymorphism (SSAP) markers to investigate the genetic diversity and population genetic structure of nine Tunisian Vicia faba populations belonging to the minor and major faba bean’s sub-species. Threeprimers were used (PDR1, Tps19 and Tvf4) in this study. These primers gave good SSAP marker profiles, high number of bands obtained per gel and a high percentage of polymorphic bands as confirmed in a previous study. Indeed, these primers provided a total of 173 amplified bands, with 123 of them being polymorphic. Shannon indexes ranges from 0.166 to 0.248 with an average of 0.207. The genetic diversity within population of 0.743 was clearly higher than that of among population genetic diversity (Dst = 0.138), indicating an out-crossing predominance in the studied populations. The Dst value showed that 15.6% of the total genetic variation resided among populations, a little lower than that of out-crossing species. The dendrogram grouping the populations by unweighted pair-group method with arithmetic averages(UPGMA) method revealed three main clusters. The local major faba bean ‘Batata’was the most divergent population and was separated from other population.

 

Key words: Vicia faba, SSAP marker, Genetic diversity, Tunisia.