Full Length Research Paper
References
|
Ahmed M, Borsch CM, Taylor SS, Vázquez-Laslop N, Neyfakh AA (1994). A protein that activates expression of a multidrug efflux transporter upon binding the transporter substrates. J. Biol. Chem. 269(45): 28506-28513. |
|
|
|
|
|
Ahmed M, Lyass L, Markham PN, Taylor SS, Vázquez-Laslop N, Neyfakh AA (1995). Two highly similar multidrug transporters of Bacillus subtilis whose expression is differentially regulated. J. Bacteriol. 177(14):3904-3910. |
|
|
|
|
|
Alebouyeh M, Gooran Orimi P, Azimi-rad M, Tajbakhsh M, Tajeddin E, Jahani SS, Nazemalhosseini EM, Zali MR (2011). Fatal sepsis by Bacillus circulans in an immunocompromised patient Iran J. Microbiol. 3(3):156–158. |
|
|
|
|
|
Arnold K, Bordoli L, Kopp J, Schwede T (2006). The SWISS-MODEL Workspace: A web-based environment for protein structure homology modelling. Bioinformatics 22:195-201. |
|
|
|
|
|
Baranova NN, Danchin A, Neyfakh AA (1999). Mta, a global MerR-type regulator of the Bacillus subtilis multidrug-efflux transporters. Mol. Microbiol. 5:1549-1559. |
|
|
|
|
|
Benkert P, Biasini M, Schwede T (2011). Toward the estimation of the absolute quality of individual protein structure models. Bioinformatics 27(3):343-350. |
|
|
|
|
|
Biasini M, Bienert S, Waterhouse A, Arnold K, Studer G, Schmidt T, Kiefer F, Cassarino TG, Bertoni M, Bordoli L, Schwede T (2014). SWISS-MODEL: modelling protein tertiary and quaternary structure using evolutionary information. Nucleic Acids Research; 42 (W1): W252-W258;
|
|
|
|
|
|
Changela A, Chen K, Xue Y, Holschen J, Outten CE, O'Halloran TV, Mondragón A (2003) Molecular basis of metal-ion selectivity and zeptomolar sensitivity by CueR. Science 301(5638):1383-1387 |
|
|
|
|
|
Floyd JL, Smith KP, Kumar SH, Floyd JT, Varela MF (2010). LmrS is a multidrug efflux pump of the major facilitator superfamily from Staphylococcus aureus. Antimicrob. Agents Chemother. 54(12):5406-12.
|
|
|
|
|
|
Guex N, Peitsch MC, Schwede T (2009). Automated comparative protein structure modeling with SWISS-MODEL and Swiss-PdbViewer: A historical perspective. Electrophoresis 30(1):162-173. |
|
|
|
|
|
Helmann JD, Ballard BT, Walsh CT (1990). The MerR metalloregulatory protein binds mercuric ion as a tricoordinate, metal-bridged dimer. Science 247(4945):946-948 |
|
|
|
|
|
Helmann JD, Wang Y, Mahler I, Walsh CT (1989). Homologous metalloregulatory proteins from both gram-positive and gram-negative bacteria control transcription of mercury resistance operons. J. Bacteriol. 171(1):222-9. |
|
|
|
|
|
Hinchliffe P, Greene NP, Paterson NG, Crow A, Hughes C, Koronakis V (2014). Structure of the periplasmic adaptor protein from a major facilitator superfamily (MFS) multidrug efflux pump. FEBS Lett. 588(17):3147-3153. |
|
|
|
|
|
Hopwood DA, Wright HM (1978). Bacterial protoplast fusion: recombination in fused protoplasts of Streptomyces coelicolor. Mol. Gen. Genet. 162: 307-317. |
|
|
|
|
|
Ishikawa J, Hotta K (1999). Frameplot: a new implementation of the Frame analysis for predicting protein-coding regions in bacterial DNA with a high G+C content. FEMS. Microbiol. Lett. 174: 251-253. |
|
|
|
|
|
Ivanova N, Sikorski J, Jando M, Lapidus A, Nolan M, Lucas S, Del Rio TG, Tice H, Copeland A, Cheng JF, Chen F, Bruce D, Goodwin L, Pitluck S, Mavromatis K, Ovchinnikova G, Pati A, Chen A, Palaniappan K, Land M, Hauser L, Chang YJ, Jeffries CD, Chain P, Saunders E, Han C, Detter JC, Brettin T, Rohde M, Goker M, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Klenk HP, Kyrpides NC (2010). Complete genome sequence of Gordonia bronchialis type strain (3410). Stand Genomic Sci. 2 (1): 19-28 |
|
|
|
|
|
Jiang D, Zhao Y, Wang X, Fan J, Heng J, Liu X, Feng W, Kang X, Huang B, Liu J, Zhang XC (2013). Structure of the Yajr transporter suggests a transport mechanism based on the conserved motif A. Proc. Natl. Acad. Sci. 110(36):14664-14669.
|
|
|
|
|
|
Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009). The SWISS-MODEL Repository and associated resources. Nucleic Acids Res. 37:D387-D392. |
|
|
|
|
|
Kieser T, Bibb MJ, Buttner MJ, Chater KF, Hopwood DA (2000). Practical Streptomyces genetics. The John Innes Foundation, John Innes centre, Norwich, UK. |
|
|
|
|
|
Leary JV, Nelson N, Tisserat B, Allingham EA (1986). Isolation of Pathogenic Bacillus circulans from Callus Cultures and Healthy Offshoots of Date Palm (Phoenix dactylifera L). Appl. Environ. Microbiol. 52(5):1173-1176 |
|
|
|
|
|
Maloney PC (1992). The molecular and cell biology of anion transport by bacteria. Bioessays 14:757-762 |
|
|
|
|
|
Marchler-Bauer A, Derbyshire MK, Gonzales NR, Lu S,Chitsaz F, Geer LY, Geer RC, He J, Gwadz M, Hurwitz DI, Lanczycki CJ, Lu F, Marchler GH, Song JS, Thanki N, Wang Z, Yamashita RA, Zhang D, Zheng C, Bryant SH (2015). CDD: NCBI's conserved domain database. Nucleic Acids Res. 43.
|
|
|
|
|
|
Miethke M, Schmidt S, Marahiel MA (2008). The major facilitator super family type transporter YmfE and the multidrug efflux activator Mta mediate bacillibactin secretion in Bacillus subtilis. J. Bacteriol. 190(15):5143-5152.
|
|
|
|
|
|
Navarro-Aviles G, Jimenez MA, Perez-Marin MC, Gonzalez C, Rico M, Murillo FJ, Elias-Arnanz M, Padmanabhan S (2007). Structural basis for operator and antirepressor recognition by Myxococcus xanthus CarA repressor. Mol. Microbiol. 63 (4): 980-994 |
|
|
|
|
|
Ogasawara H, Ohe S, Ishihama A (2015). Role of transcription factor NimR (YeaM) in sensitivity control of Escherichia coli to 2-nitroimidazole. FEMS Microbiol. Lett. 362(1):1-8. Crossref |
|
|
|
|
|
Pospiech A, Neumann B (1995). A versatile quick-prep of genomic DNA from Gram-positive bacteria. Trends Genet. 11: 217-218. |
|
|
|
|
|
Saidijam M, Benedetti G, Ren Q, Xu Z, Hoyle CJ, Palmer SL, Ward A, Bettaney KE, Szakonyi G, Meuller J, Morrison S, Pos MK, Butaye P, Walravens K, Langton K, Herbert RB, Skurray RA, Paulsen IT, O'reilly J, Rutherford NG, Brown MH, Bill RM, Henderson PJ (2006). Microbial drug efflux proteins of the major facilitator superfamily. Curr. Drug Targets 7(7):793-811. |
|
|
|
|
|
Sambrook J, Russell DW (2001) Molecular cloning: a laboratory manual, 3rd Eds. Cold Spring harbor laboratory Press, Cold Spring Harbor, New York |
|
|
|
|
|
Shilton BH (2015). Active transporters as enzymes: an energetic framework applied to major facilitator superfamily and ABC importer systems. Biochem. J. 467(2):193-199. Crossref |
|
|
|
|
|
Simm R, Vörös A, Ekman JV, Sødring M, Nes I, Kroeger JK, Saidijam M, Bettaney KE, Henderson PJ, Salkinoja-Salonen M, Kolstø AB (2012). C4707 is a major facilitator superfamily-multidrug resistance transport protein from Bacillus cereus implicated in fluoroquinolone tolerance. PLoS One. 7(5):e36720.
|
|
|
|
|
|
Srinivasan VB, Singh BB, Priyadarshi N,, Chauhan NK, Rajamohan G (2014). Role of novel multidrug efflux pump involved in drug –resistance in Klebsiella pneumoniae. PLoS One. 9(5):
|
|
|
|
|
|
Staden R (1996). The Staden sequence analysis package. Mol. Biotechnol. 5:233-241. |
|
|
|
|
|
Stover CK, Pham XQ, Erwin AL, Mizoguchi SD, Warrener P, Hickey MJ, Brinkman FS, Hufnagle WO, Kowalik DJ, Lagrou M, Garber RL, Goltry L, Tolentino E, Westbrock-Wadman S, Yuan Y, Brody LL, Coulter SN, Folger KR, Kas A, Larbig K, Lim R, Smith K, Spencer D, Wong GK, Wu Z, Paulsen IT, Reizer J, Saier MH, Hancock RE, Lory S, Olson MV (2000). Complete genome sequence of Pseudomonas aeruginosa PA01, an opportunistic pathogen. Nature 406 (6799):959-964. |
|
|
|
|
|
Tait E, Simon MC, King S, Brown AJ, Gow NA, Shaw DJ (1997). A Candida albicans genome project: cosmid contigs, physical mapping, and gene isolation. Fungal Genet. Biol. 21(3):308-314. |
|
|
|
|
|
Thompson JD, Higgins DG, Gibson TJ (1994). CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22:4673-4680. |
|
|
|
|
|
Wasaznik A, Grinholc M, Bielawski KP (2009). Active efflux as the multidrug resistance mechanism. Postepy Hig Med Dosw. 63:123-133. |
|
|
|
|
|
White O, Eisen JA, Heidelberg JF, Hickey EK, Peterson JD,Dodson RJ, Haft DH, Gwinn ML, Nelson WC, Richardson DL, Moffat KS, Qin H, Jiang L, Pamphile W, Crosby M, Shen M, Vamathevan JJ, Lam P, McDonald L, Utterback T, Zalewski C, Makarova KS, Aravind L, Daly MJ, Minton KW, Fleischmann RD, Ketchum KA, Nelson KE, Salzberg S, Smith HO, Venter JC, Fraser CM (1999).Genome sequence of the radioresistant bacterium Deinococcus radiodurans R1. Science 286 (5444):1571-1577 |
|
|
|
|
|
Wisedchaisri G, Park MS, Iadanza MG, Zheng H, Gonen T (2014). Proton-coupled sugar transport in the prototypical major facilitator superfamily protein xyle. nat. commun. 4;5:4521.
|
|
|
|
|
|
Xu X, Chen J, Xu H, Li D (2014). Role of a majorfacilitator superfamil transporter in adaptation capacity of Penicillium funiculosum under extreme acidic stress. Fungal Genet. Biol. 69:75-83.
|
|
|
|
|
|
Yan N (2013). Structural advances for the major facilitator superfamily (MFS) transporters. Trends Biochem. Sci. 38:151–159. |
|
|
|
|
|
Zhang Z, Wang R, Xie J (2015). Mycobacterium smegmatis MSMEG_3705 Encodes a Selective Major Facilitator Superfamily Efflux Pump with Multiple Roles. Curr. Microbiol. DOI10.1007/s00284-015-0783-0 |
|
|
|
|
|
Zheleznova EE, Markham PN, Neyfakh AA, Brennan RG (1999). Structural basis of multidrug recognition by BmrR, a transcription activator of a multidrug transporter. Cell 96(3):353-62 |
|
Copyright © 2024 Author(s) retain the copyright of this article.
This article is published under the terms of the Creative Commons Attribution License 4.0
