Journal of
Medicinal Plants Research

  • Abbreviation: J. Med. Plants Res.
  • Language: English
  • ISSN: 1996-0875
  • DOI: 10.5897/JMPR
  • Start Year: 2007
  • Published Articles: 3835

Full Length Research Paper

Meta-analysis of Arabidopsis thaliana under abscisic acid and salt stress

Guowu Yu1, Weidong Zang2#, Xianquan Yang1, Lishan Wang2,3#, Zongxiang Tang4 and Peigao Luo4*#
1Department of Biotechnology, Agronomy College, Sichuan Agriculture University, 211 Huimin Road. Wenjiang District, Chengdu, Sichuan, 611130, China. 2Shanghai Fenghe info-Tech Co., Ltd., Shanghai, 200241, China. 3Department of Biology, Shanghai Jiaotong University, Dongchuan Road, Shanghai, 200241, China. 4State Key Laboratory of Plant Breeding and Genetics, Sichuan Agricultural University, 211 Huimin Road, Wenjiang District, Chengdu, 611130, China.           #These authors contributed to the work equally.
Email: [email protected]

  •  Accepted: 11 August 2011
  •  Published: 30 October 2011

Abstract

To investigate the abscisic acid and salt stress on Arabidopsis and find the potential response genes, we collected the gene expression profiles of Arabidopsis under abscisic acid (ABA) and salt stress from NCBI, and merge the 2 different datasets by meta-analysis method. Thus, the different expressed genes identified from the merged data presented the responses of Arabidopsis under both abscisic acid and salt stress. We found that the genes ALDH7B4, ATTSPO, ANAC019, AZF2, and ATADH1 are induced upon both abiotic stress and abscisic acid and identified that expansion domain is highly related to both abiotic stress and abscisic acid.

 

Key words: Meta-analysis, salt stress, abscisic acid (ABA) stress, Arabidopsis.

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This article is published under the terms of the Creative Commons Attribution License 4.0

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