African Journal of
Biotechnology

  • Abbreviation: Afr. J. Biotechnol.
  • Language: English
  • ISSN: 1684-5315
  • DOI: 10.5897/AJB
  • Start Year: 2002
  • Published Articles: 12488

Full Length Research Paper

Comparison of protocols for genomic DNA extraction from ‘velame pimenta’ (Croton linearifolius), a native species to the Caatinga, Brazil

M. M. Scaldaferri1,2, J. S. Freitas1, E. S. L. Santos1,2, J.G. P. Vieira1, Z. S. Gonçalves1 and C. B. M. Cerqueira-Silva1*
1Laboratory of Applied Molecular Genetics, Departamento de Estudos básicos e Instrumentais, Universidade Estadual do Sudoeste da Bahia, Itapetinga - Ba, 45700-000, Brazil. 2Laboratory of general biology and botany, Departamento de Estudos básicos e Instrumentais, Universidade Estadual do Sudoeste da Bahia, Itapetinga - Ba, 45700-000, Brazil.
Email: [email protected]

  •  Accepted: 29 May 2013
  •  Published: 31 July 2013

Abstract

The Caatinga biome occupies some 12% of the Brazilian territory, which is present in at least nine states. The species that constitute its biodiversity have the potential to be used as natural resources, among them are approximately 700 species of the genusCroton. As an example of this potential, the Croton linearifolius specie is used by local communities as a natural insecticide. Associated with the economic potential of the Caatinga species, one must stress the risk of extinction or genetic erosion due to the growing deforestation of natural areas of this biome. These factors make it relevant in genetic studies in order to guide conservation strategies. Considering the lack of molecular studies involving C. linearifolius, we compared the efficiency of six protocols for genomic DNA extraction previously described in literature. The DNA extraction buffers [based on the use of Cetyl trimethylammonium bromide (CTAB),sodium dodecyl sulfate (SDS), mannitol and sorbitol] were different in their efficiency to obtaining the genomic DNA of C. linearifloius. In general, protocols using CTAB buffer were more efficient. The use of liquid nitrogen in the maceration process was also evaluated and its use was considered a no necessary factor in obtaining DNA in adequate quantity and quality for PCR platform procedures.

Key words: DNA Isolation, molecular markers, native species of Caatinga.