African Journal of
Biotechnology

  • Abbreviation: Afr. J. Biotechnol.
  • Language: English
  • ISSN: 1684-5315
  • DOI: 10.5897/AJB
  • Start Year: 2002
  • Published Articles: 12487

Full Length Research Paper

Sub-cellular distribution of two salt-induced peptides in roots of Oryza sativa L. var Nonabokra

S. M. Saqlan Naqvi1*, S. Qasim Raza2, M. Zeeshan Hyder2, Cengiz Vali Ozalp2, Hussyin Avni Oktem2 and Meral Yucel2
1Department of Biochemistry, PMAS- Arid Agriculture University Rawalpindi, Pakistan. 2Biology Department, Middle East Technical University, Ankara-06531, Turkey.  
Email: [email protected]

  •  Accepted: 23 April 2009
  •  Published: 15 September 2009

Abstract

Living systems respond to changing environment by changing gene expression. In addition to changes in the level of expression of existing proteins, some new proteins may be synthesized. Such proteins not only can serve as markers, but may also play important role in adjusting to that specific environment. Targeting of these proteins to specific location within or outside the cell may also yield important clues to their function. In such a pursuit, ten days old seedlings of a relatively salt tolerant rice variety grown on MS medium were treated with 2% sodium chloride for three days. Root were harvested, ground, and fractionated in to sub-cellular components. Microsomes were further fractionated into constituent membranes. Proteins from these fractions were analyzed by SDS-PAGE and/or two dimensional separations. Results show induction of two new polypeptides which were present in total protein extract and soluble fractions. All other fractions failed to reveal induction of any new peptide under experimental conditions used.

 

Key words: 2-D electrophoresis, fractionation, salt induced proteins, sub-cellular localization.