African Journal of
Biotechnology

  • Abbreviation: Afr. J. Biotechnol.
  • Language: English
  • ISSN: 1684-5315
  • DOI: 10.5897/AJB
  • Start Year: 2002
  • Published Articles: 12487

Full Length Research Paper

Detection of somaclonal variation by random amplified polymorphic DNA analysis during micropropagation of Phalaenopsis bellina (Rchb.f.) Christenson

Khoddamzadeh A. A1, Sinniah U. R1*, Kadir M. A2, Kadzimin S. B1, Mahmood M3 and Sreeramanan S4
1Department of Crop Science, Faculty of Agriculture, Universiti Putra Malaysia (UPM), 43300, Serdang, Malaysia. 2Department of Agrotechnology, Faculty of Agriculture, Universiti Putra Malaysia (UPM), 43300, Serdang, Malaysia. 3Department of Biochemistry, Faculty of Biotechnology and Biomolecular Sciences, Universiti Putra Malaysia (UPM), 43300, Serdang, Malaysia. 4School of Biological Sciences, Universiti Sains Malaysia (USM), Minden Heights, 11800, Georgetown, Penang, Malaysia.
Email: [email protected]

  •  Accepted: 23 August 2010
  •  Published: 04 October 2010

Abstract

Phalaenopsis bellina (Rchb.f.) Christenson orchid species are known for their beautiful flower shape, graceful inflorescence and fragrance. Protocorm-like bodies (PLBs) of P. bellina were induced from leaf segments. The PLBs were then subjected to proliferation using ½ strength Murashige and Skoog (MS) media with two subcultures at three months intervals. Twelve decamer random amplified polymorphic DNA (RAPD) primers were used to study somaclonal variation among the mother plant, the initially induced PLBs and proliferated PLBs after 3 and 6 months in culture. Eight out of twelve primers produced 172 bands with 18 polymorphic bands in all the treatments. The amplified products varied between 125 to 8000 bp. Among the primers used, P 16 produced the highest number of bands (29), while primer OPU 10 produced the lowest number (15). The range of similarity coefficient was from 0.83 to 1.0 among the different sub-cultures and mother plant (MP). It was found that minimal or no changes occurred between the MP and the PLBs produced after 3 months of induction. The induced PLBs were then subcultured for six months for proliferation and this resulted in about 17% dissimilarity with MP. It is reported that micropropagation of P. bellina can be carried out successfully using ½ strength MS media for 6 months but further proliferation may result in somaclonal variation which might change the prolific characteristic of this orchids.

 

Key word: Moth orchid, somaclonal variation, random amplified polymorphic DNA, protocorm-like bodies.

Abbreviation

MS, Murashige and Skoog medium; TDZ, 1-phenyl-3-(1,2,3-thiadiazol-5-yl)-urea; PLBs, protocorm-like bodies; RAPD, random amplified polymorphic DNA; MP, mother plant; RFLP, restriction fragment length polymorphism; PCR, polymerase chain reaction; CTAB, cetyltrimethylammonium bromide; EDTA, ethylenediaminetetraacetic acid; PCI, phenol/chloroform/isoamyl alcohol; TDZ, thidiazuron.