African Journal of
Microbiology Research

  • Abbreviation: Afr. J. Microbiol. Res.
  • Language: English
  • ISSN: 1996-0808
  • DOI: 10.5897/AJMR
  • Start Year: 2007
  • Published Articles: 5233

Full Length Research Paper

16s rDNA sequence characterization and homogeneity of halophilic Bacillus sp. isolated from athalosaline lake (Al Jouf, Saudi Arabia)

Maher M. Al-Enazi
  • Maher M. Al-Enazi
  • 1. Vice Rector of Academic Affairs, Aljouf Univeristy, Saudi Arabia; 2. Department of Clinical Laboratory Sciences, College of Applied Medical sciences, Salman Bin Abdulaziz University, Saudi Arabia.
  • Google Scholar
A. Z. El-Bahrawy
  • A. Z. El-Bahrawy
  • Faculty of Science, biology department , Aljouf University, Saudi Arabia
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Bilal Ahmad Tantry
  • Bilal Ahmad Tantry
  • Department of Microbiology, College of Medicine, Aljouf University, Saudi Arabia
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Rahiman Shaik*
  • Rahiman Shaik*
  • Department of Biochemistry, College of Medicine, Aljouf University, Saudi Arabia
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  •  Received: 21 May 2014
  •  Accepted: 08 September 2014
  •  Published: 26 September 2014

Abstract

Moderate halophilic bacteria from Dowma al Jandal in extreme north Al Jouf were isolated using cultural-dependent methods. Halophiles from hypersaline environments possess a biotechnological potential. Polymerase chain reaction (PCR) amplification of the 16s rRNA gene and phylogentic analysis were used to identify strains. Culturing was done aerobically in chemically defined media (CDM). Salt concentration (15%) was used at pH 7.2. Universal bacterial primers were used to amplify 16SrDNA from chromosomal DNA isolated from the four distinct colonies. Four moderate halophilic bacterial isolates were analyzed and identified wih 16srDNA sequencing as Virgibacillus salarius, Bacillus subtilis, Bacillus sp., and Virgibacillus marismortui. Comparison of the 16srDNA sequence alignment to reference sequence data bases showed samples M1, M2, M3 and M4 have 95-99% homology. All of the four isolates had at least 95% similarity to the published sequences implying that they could be species within the described genera.

Key words: Moderate halophiles, hypersaline lake, Bacillus sp., 16srDNA sequencing.