African Journal of
Microbiology Research

  • Abbreviation: Afr. J. Microbiol. Res.
  • Language: English
  • ISSN: 1996-0808
  • DOI: 10.5897/AJMR
  • Start Year: 2007
  • Published Articles: 5233

Full Length Research Paper

Cloning and characterization of the 14-3-3 protein gene from Ipomoea batatas (L.) Lam

Mengjie Chang, Xiang Tao, Yinhong Gu, Guoxiu Lin, Huanhuan Shao, Qinghua Cao and Yizheng Zhang*
College of Life Science, Sichuan University, Key Laboratory of Resource Biology and Eco-environment, Ministry of Education, Sichuan Key Laboratory of Molecular Biology and Biotechnology, Chengdu, 610064, China.
Email: [email protected]

  •  Accepted: 05 December 2011
  •  Published: 31 March 2012

Abstract

The 14-3-3 proteins are a group of highly conserved and widely distributed eukaryotic proteins with diverse functions. In plants, it regulates basal metabolism, ion transport, cell passage, enzyme activity and gene expression, and it is also important in disease resistance, anti-oxidation and drought resistance. Based on assembled sequences ofsweet potato (Ipomoea batatas L. Lam) transcriptome, 14-3-3 protein cDNAs were cloned for the first time, and the sequencing analysis revealed the presence of three highly homologous isoforms of 14-3-3 protein cDNAs, designated as Ib14-3-3a, Ib14-3-3b and Ib14-3-3c. Three cDNA isoforms are all 1176 bp in length with 7 mutation sites and have a 789 bp of open reading frame encoding a polypeptide of 262 amino acids. The resultsfrom digital gene expression (DGE) profiling showed that the expression levels of 14-3-3genes are different among tissues, predominantly in harvested tuberous roots (223.08 TPM) and very low in mature leaves (85.07 TPM) , which were also confirmed by semi-quantitative Reverse transcription polymerase chain reaction  (RT-PCR) analysis.

Key words: 14-3-3 protein, Ipomoea batatas, gene cloning, digital gene expression profiling, RT-PCR analysis.