African Journal of
Microbiology Research

  • Abbreviation: Afr. J. Microbiol. Res.
  • Language: English
  • ISSN: 1996-0808
  • DOI: 10.5897/AJMR
  • Start Year: 2007
  • Published Articles: 5233

Review

Microbial intervention in agriculture: An overview

Amrita Sengupta*
  • Amrita Sengupta*
  • Department of Agronomy, Faculty of Agriculture, Bidhan Chandra Krishi Viswavidyalaya, Nadia ? 741252, West Bengal, India
  • Google Scholar
Sunil Kumar Gunri
  • Sunil Kumar Gunri
  • Department of Agronomy, Faculty of Agriculture, Bidhan Chandra Krishi Viswavidyalaya, Nadia ? 741252, West Bengal, India
  • Google Scholar


  •  Received: 07 December 2014
  •  Accepted: 27 April 2015
  •  Published: 06 May 2015

References

Abd-Alla MH (1994a). Solubilization of rock phosphates by Rhizobium and Bradyrhizobium. Folia Microbiol. 39: 53-56.
Crossref

 

Ahmad I, Ahmad F, Pichtel H (eds.), (2011). Microbes and Microbial Technology: Agricultural and Environmental Applications, DOI 10.1007/978-1-4419-7931-5_1

 
 

Anjum MA, Sajjad MR, Akhtar N, Qureshi MA, Iqbal A, Jami AR, Hassan M (2007). Response of cotton to plant growth promoting rhizobacteria (PGPR) inoculation under different levels of nitrogen. J. Agric. Res. 45(2):135-143.

 
 

Arora P, Gaur AC (1979). Microbial solubilization of different inorganic phosphates. Indian J Exp. Biol. 17: 1258-1261.

 
 

Arshad M, Frankenberger WT Jr (1998). Plant growth regulating substances in the rhizosphere. Microbial production and function. Adv. Agron. 62: 46-51.

 
 

Badr MA, Shafei AM, and Sharaf SH, El-Deen (2006). The dissolution of K and phosphorus bearing minerals by silicate dissolving bacteria and their effect on sorghum growth. Res. J Agric. Biol. Sci. 2: 5-11.

 
 

Baldani VLD, Baldani JI, Dobereiner J (2000). Inoculation of rice plants with the endophyticdiazotrophsHerbaspirillumsseropidicae. Biol. Fertil. Soils 30: 485-491.

 
 

Banerjee MR, Yesmin L, Vessey JK (2006). Plant growth promoting rhizobacteria as biofertilizers and biopesticides. In: Rai MK (ed) Handbook of microbial biofertilizers. Haworth Press, New York

 
 

Barassi CA, Creus CM, Casanovas EM, Sueldo RJ (2000). Could Azospirillummitigate abiotic stress effects in plants? Auburn University. http://www.ag.auburn.edu/argentina/pdfmanuscripts/brassi.pdf

 
 

Barker WW, Welch SA, Chu S, Banfield JF (1998). Experimental observations of the effects of bacteria on aluminosilicate weathering. Am. Mineral. 83: 1551-1563.

 
 

Basak BB, Biswas DR (2008). Influence of potassium solubilizing microorganism (Bacillus mucilaginous) and waste mica on potassium uptake dynamics by sudan grass (Sorghum vulgare Pers) grown under two Alfisols. Plant Soil. 317: 235-255.
Crossref

 
 

Basak BB, Biswas DR (2010). Coinoculation of potassium solubilizing and nitrogen fixing bacteria on solubilization of waste mica and their effect on growth promotion and nutrient acquisition by a forage crop. Biology and Fertility of Soils. 46:641-648.
Crossref

 
 

Bashan Y (1998). Azospirillumplant growth-promoting strains are nonpathogenic on tomato, pepper, cotton, and wheat. Can. J. Microbiol. 44:168-174.
Crossref

 
 

Bennett PC, Choi WJ, Rogera JR (1998). Microbial destruction of feldspars. Mineral Manage. 8(62A):149-150.
Crossref

 
 

Blanco A (2003). Immobilization of nonviable cyanobacteria and their use for heavy metal adsorption from water in Environmental biotechnology and cleaner bioprocesses. Oluguin EJ, Sanehez, Hernandez E, editors.Philadelphia Taylor & Amp, Francis. P. 135.

 
 

Bloemberg GV, Lugtenberg BJJ (2001). Molecular basis of plant growth promotion and biocontrol by rhizobacteria. CurrOpin Plant Biol. 4: 343-350.
Crossref

 
 

Boddey RM, Urquiaga S, Suhet AR, Peres JR, Neves MCP (1990). Quantification of the contribution of N2fixation to field-grown legumes: a strategy for the practical application of the 15N isotope dilution technique. Soil Biol. Biochem. 22: 649-655.
Crossref

 
 

Brierley JA (1985). Use of microorganisms for mining metals. In: Halvorson HO, Pramer D, Rogul M (eds) Engineered organisims in the environment: scientifc issues. ASM Press, Washington. pp. 141-146

 
 

Chabot R, Antoun H, Cescas MP. (1996a). Growth promotion of maize and lettuce by phosphate-solubilizing Rhizobium leguminosarumbiovarphaseoli. Plant Soil. 184: 311-321.
Crossref

 
 

Chabot R, Antoun H, Kloepper JW, Beauchamp CJ (1996b). Root colonization of maize and lettuce by bioluminescent Rhizobiumleguminosaurmbiovarphaseoli. Appl. Environ. Microbiol. 62: 2767-2772.
Pubmed

 
 

Choudhury ATMA, Kennedy IR (2004). Prospects and potentials for systems of biological nitrogen fixation in sustainable rice production. Biol Fert. Soils, 39: 219-227.
Crossref

 
 

Cook JH, Beyea J, and Keeler KH (1991). Potential impacts of biomass production in the United States on biological diversity. Annu. Rev. Energ. Environ. 16: 401-431.
Crossref

 
 

Crowley TJ (2000). Causes of climate change over the past 1000 years. Science. 289:270-277
Crossref

 
 

Dakora FD (2003). Defining new roles for plant and rhizobial molecules in sole and mixed plant cultures involving symbiotic legumes. New Phytol. 158: 39-49.
Crossref

 
 

Dey R, Pal KK, Bhatt DM, Chauhan SM (2004). Growth promotion and yield enhancement of peanut (ArachishypogaeaL) by application of plant growth promoting rhizobacteria. Microbiol. Res. 159: 371-394.
Crossref

 
 

Duque FF, Neves MCP, Franco AA, Victoria RL, and Boddey RM (1995). The response of field grown Phaseolus vulgaris to Rhizobium inoculation and the quantification of dinitrogen fixation using 15N. Plant and Soil. 88: 333-343.
Crossref

 
 

Ehrlich HL (1990). Geomicrobiology, 2nd edn. Dekker, New York, p 646.

 
 

Ehteshamul-Haque S, Ghaffar A (1993). Use of Rhizobia in the control of root diseases of sunflower, okra, soybean and mungbean. J. Phytopathol. 138: 157-163.
Crossref

 
 

El Mohandes MAO (1999). The use of associative diazotrophs with different rates of nitrogen fertilization and compost to enhance growth and N2-fixation of wheat. Bulletin of Faculty of Agriculture, University of Cairo, 50: 729-753.

 
 

Elbadry M, El-Bassel A, Elbanna K (1999). Occurrence and dynamics of phototrophic purple nonsulphur bacteria compared with other asymbiotic nitrogen fixers in rice fields of Egypt. World J. Microbiol. Biotechnol. 15: 359-362.
Crossref

 
 

Estrada-delos Station P, Bustitio-Cristales R, Caballero-Mallado J (2001). Burkholderia, a genus rich in plant-associated nitrogen fixers with wide environmental and geographic distribution. Appl. Environ. Microbiol. 67: 279-2798.

 
 

Frankenberger WT Jr, Karlson U (1992). Dissipation of soil selenium by microbial volatilization. In: Adriano DC (ed). Bio-geochemistry of trace metals. Lewis, Boca Raton, Fla. pp. 365-381.

 
 

Galal YGM, El-Ghandour IA, Aly SS, Soliman S, Gadalla A (2000). Non-isotopic method for the quantification of biological nitrogen fixation and wheat production under field conditions. Biol. Fertil. Soils. 32: 47-51.
Crossref

 
 

Ganguly TK, Jana AK, Moitra DN (1999). An evaluation of agronomic potential of Azospirillumbrasilenseand Bacillus megateriumin fibre-legume-cereal system in an Aerichaplaquept. Indian J. Agric Res. 33: 35-39.

 
 

George T, Singleton PW, and Bohlool BB (1988). Yield, soil nitrogen uptake and nitrogen fixation by soybean from four maturity groups grown at three elevations. Agron. J. 80: 563-567.
Crossref

 
 

Giller KE, Nambiar PTC, Sirinivasa RGOB, Dart PJ, Day lM (1987). Acomparision of nitrogen fixation in genotypes of groundnut (Arachis hypogea L.) using ISNisotop dilution. Bio. Fertil. Soils. 5:23-25.
Crossref

 
 

Goldstein AH (1986). Bacterial solubilization of microbial phosphates: a historical perspective and future prospects. Am. J. Altern Agric. 1:51-57.

 
 

Gunri SK, Biswas T, Mondal GS, Nath R, Kundu CK (2014). Effect of biofertilizer on productivity of groundnut (Arachishypogaea L.) in red and laterite zone of West Bengal. Karnataka J. Agric. Sci. 27(2):230-231

 
 

Gunri SK, Nath R (2012). Effect of organic manures, biofertilizers and biopesticides on productivity of summer groundnut (Arachishypogeae L.) in red and laterite zone of West Bengal. Legume Res. 35(2):144-148.

 
 

Halder AK, Chakrabarty PK (1993). Solubilization of inorganic phosphate by Rhizobium. Folia Microbiol. 38:325-330.
Crossref

 
 

Han HS, Supanjani and Lee KD, (2006). Effect of co-inoculation with phosphate and potassium solubilizing bacteria on mineral uptake and growth of pepper and cucumber. Plant Soil Environ. 52:130-136.

 
 

Hardarson G (1993). Methods for enhancing symbiotic nitrogen fixation. Plant Soil 152:1-17
Crossref

 
 

Hayat R (2005). Sustainable legume cereal cropping system through management of biological nitrogen fixation in Pothwar. PhD Dissertation. PMAS Arid Agriculture University, Rawalpindi, Pakistan.

 
 

Hayat R, Ali S (2004) Potential of summer legumes to fix nitrogen and benefit wheat crop under rainfed condition. J. Agron. 3:273-281.
Crossref

 
 

Hayat R, Ali S (2010). Nitrogen fixation of legumes and yield of wheat under legumes-wheat rotation in Pothwar. Pak J. Bot. 42(4):2317-2326.

 
 

Hayat R, Ali S, Ijaz SS, Chatha TH, Siddique MT (2008b). Estimation of N2-fixation of mung bean and mash bean through xylem uriede technique under rainfed conditions. Pak J. Bot. 40(2):723-734.

 
 

Hayat R, Ali S, Siddique MT, Chatha TH (2008a). Biological nitrogen fixation of summer legumes and their residual effects on subsequent rainfed wheat yield. Pak J. Bot. 40(2):711-722.

 
 

Hegazi NA, Faye M, Amin G, Hamza MA, Abbas M, Youssef H, Monib M (1998). Diazotrophsassoiciated with non-legumes grown in sandy soil. In: Malik KA, Mirza MS, Ladha JK (eds) Nitrogen fixation with non-legumes. Kulwer, Dordrecht, pp. 209-222.
Crossref

 
 

Herridge DF, Marcellos H, Felton WL, Turner GL, Peoples MB (1993). Legume N2 fixation an efficient source of N for cereal production, Nuclear methods in soil-plant aspects of sustainable agriculture (Proc. Sem. Colombo, 1993). IAEA, Vienna.

 
 

Illmer P, Schinner F (1992). Solubilization of inorganic phosphates by microorganisms isolated from forest soil. Soil Biol Biochem. 24:389-395.
Crossref

 
 

Iruthayaraj MR (1981). Let Azotobacter supply nitrogen to cotton. Intensive Agric. pp. 19-23.

 
 

Islam N, Rao CVS, Kennedy IR (2002). Facilitating a N2-fixing symbiosis between diazotrophs and wheat. In: Kennedy IR, Choudhury ATMA (eds) Biofertilisers in action. Rural Industries Research and Development Corporation, Canberra, pp. 84-93.

 
 

Jackson T (1999). Renewable energy. Summary paper for the renewables series. Energy Policy 20:861-883.
Crossref

 
 

Jadhav RS, Thaker NV, Desai A (1994). Involvement of the siderophore of cowpea Rhizobium in the iron nutrition of the peanut. World J. Microbiol Biotechnol. 10:360-361.
Crossref

 
 

James EK, Gyaneshwar P, Barraquio WL, Mathan N, Ladha JK (2000). Endophyticdiazotrophs associated with rice. In: Ladha JK, Reddy PM (eds) The quest for nitrogen fixation in rice. International Rice Research Institute, Los Banõs. pp. 119-140.

 
 

Kanungo PK, Panda D, Adhya TK, Ramakrishnan B, Rao VR (1997). Nitrogenase activity and nitrogen fixing bacteria associated with rhizosphere of rice cultivars. J. Sci. Food Agric. 73: 485-488.
Crossref

 
 

Keating JDH, Chapmanian N, Saxena MC (1998). Effect of improved management of legumes in a legume-cereal rotation on field estimates of crop nitrogen uptake and symbiotic nitrogen fixation in northern Syria. J. Agric. Sci. 110: 651-659.
Crossref

 
 

Kennedy IR, Choudhury AIMA, KecSkes ML (2004). Non-Symbiotic bacterial diazotrophs in crop-farming systems: can their potential for plant growth promotion be better exploited? Soil Biol. Biochem. 3 6(8):1229-1244.

 
 

Kennedy IR, Islam N (2001). The current and potential contribution of asymbiotic nitrogen requirements on farms: a review. Aust. J. Exp. Agric. 41:447-457.
Crossref

 
 

Kennedy IR, Tchan Y (1992). Biological nitrogen fixation in no leguminous field crops: recent advances. Plant Soil. 141: 93-118.
Crossref

 
 

Kertesz MA, Mirleau P (2004). The role of soil microbes in plant sulphur nutrition. J. Exp. Bot. 55(404):1939-1945.
Crossref

 
 

Kloepper JW, Beauchamp CJ (1992). A review of issues related to measuring colonization of plant roots by bacteria. Can. J. Microbiol. 38:1219-1232.
Crossref

 
 

Li FC, Li S, Yang YZ, and Cheng LJ, (2006). Advances in the study of weathering products of primary silicate minerals, exemplified by mica and feldspar. Acta Petrol Mineral, 25: 440-448.

 
 

Liu D, Lian B, and Dong H, (2012). Isolation of Paenibacillus sp. and assessment of its potential for enhancing mineral weathering. Geomicrobiol. J. 29: 413-421.
Crossref

 
 

Majumder A, Ghosh S, Saha N, Kole SC, Sarkar S (2013). Arsenic accumulating bacteria isolated from soil for possible application in bioremediation. J. Environ. Biol. 34:841-846.
Pubmed

 
 

Majumder A, Bhattacharyya K, Bhattacharyya S, Kole SC (2013). Arsenic-tolerant, arsenite-oxidising bacterial strains in the contaminated soils of West Bengal, India. Sci. Total Environ. 463-464:1006-1014.
Crossref

 
 

Malik KA, Mirza MS, Hassan U, Mehnaz S, Rasul G, Haurat J, Bauy R, Normanel P (2002). The role of plant associated beneficial bacteria in rice-wheat Cropping System. In: Kennedy IR, Chaudhry ATMA (eds) Biofertilisers in action. Rural industries research and development Corporation, Canberra, pp. 73-83.

 
 

Martinez-Romero E, Gutierrez-Zamora ML, Estrada P, Caballero- Mellado J, Hernandez-Lucas I (2000). Natural endophytic association between Rhizobium Etliand maize. In: Book of abstracts, 17th North American conference on symbiotic nitrogen fixation, 23-28 July 2000. University of Laval, Quebec, Canada. p. 51.

 
 

Matiru VN, Dakora FD (2004). Potential use of rhizobial bacteria as promoters of plant growth for increased yield in landraces of African cereal crops. Afr. J. Biotechnol. 3(1):1-7.
Crossref

 
 

Mclnroy JA, Kloepper JW (1995). Survey of indigenous endophytes from cotton and sweet corn. Plant Soil. 173: 337-342.
Crossref

 
 

Meyer SLF, Massoud SI, Chitwood DJ, Roberts DP (2000). Evaluation of Trichodermavirensand Burkholderiacepaciafor antagonistic activity against root-knot nematode, Meloidogyne incognita. Nematol. 2: 871-879.
Crossref

 
   

 

Mittal V, Singh O, Nayyar H, Kaur J, Tewari R (2008). Stimulatory effect of phosphate solubilizing fungal strains (Aspergillusawamori andPenicilliumcitrinum) on the yield of chickpea (CicerarietinumL. cv.GPF2). Soil Biol. Biochem. 40: 718-727.
Crossref

 

Muhammad AI, Muhammad K, Muhammad SS, Maqshoof A, Nawaf S, Naeem A (2012). Integrated use of Rhizobium leguminosarum, Plant Growth Promoting Rhizobacteria and Enriched Compost for Improving Growth, Nodulation and Yield of Lentil (Lens culinarisMedik.). Chilean J. Agric. Res. 72(1):104-110.
Crossref

 
 

Panwar JDS, Singh O (2000). Response of Azospirillum and Bacillus on growth and yield of wheat under field conditions. Indian J. Plant Physiol. 5: 108-110.

 
 

Patil PL, Patil SP (1984). Uptake of nitrogen by cotton inoculated with Azotobacter. J Maharashtra Agric. Uni. 9(17): 1-172.

 
 

Paynel F, Murray PJ, Cliquet B (2001). Root exudates: a pathway for short-term N transfer from clover and ryegrass. Plant Soil. 229: 235-
Crossref

 
 

Peoples MB, Craswell ET (1992). Biological nitrogen fixation: investments, expectations and actual contributions to agriculture. Plant Soil. 141:13-39.
Crossref

 
 

Plessner O, Klapach T, Guerinot ML (1993). Siderophore utilization by Bradyrhizobiumjaponicum. Appl. Environ. Microbiol. 59:1688-1690.
Pubmed

 
 

Rajendran P, Muthukrishnan J, Gunasekaran P (2003). Microbes in heavy metal remediation. Indian. J. Exp. Biol. 41: 935-944.
Pubmed

 
 

Reddy MS, Kumar S, Babita K (2002). Biosolubilization of poorly soluble rock phosphates by Aspergillustubingensisand Aspergillusniger. Bioresour. Technol. 84:187-189.
Crossref

 
 

Reis VM, Baldani JI, Baldani VLD, Döberener J (2000). Biological dinitrogen fixation in the graminae and palm trees. Crit. Rev. Plant Sci. 19:227-247.
Crossref

 
 

Rodríguez H, Fraga R (1999). Phosphate solubilizing bacteria and their role in plant growth promotion. Biotechnol. Adv. 17:319-339.
Crossref

 
 

Rodríguez H, Fraga R, Gonzalez T, Bashan T (2006). Genetics of phosphate solubilization and its potential applications for improving plant growth-promoting bacteria. Plant Soil. 287:15-21.
Crossref

 
 

Roper MM, Ladha JK (1995). Biological N2-fixation by heterotrophic and phototrophic bacteria in association with straw. Plant Soil. 174:211-224.
Crossref

 
 

Sankar V (2009). Biotech solutions to Organic Agriculture Vesicular ArbuscularMicorrhizae {V.A.M}. Agroforestry - A blog on Agrihortisilviculture. http://agrowmania.blogspot.in. Accessed 25 September 2014

 
 

Shah Z, Shah SH, Peoples MB, Schwenke GD, Hrridge DF (2003). Crop residue and fiertilizer N effects on nitrogen fixation and yields of legume-cereal rotations and soil organic fetility. Field Crops Res. 83: 1-11.
Crossref

 
 

Shankariah C, Hunsigi G (2001). Field responses of sugarcane to associative N2 fixers and P solubilishers. In: Hogarth DM (ed) Proceedings of the 24th international society of sugarcane Technologists Congress, 17-21 September 2001. The Australian Society of Sugercane Technologists, Brisbane. pp. 40-45.

 
 

Sheng XF and He LY (2006) Solubilization of potassium bearing minerals by a wild type strain of Bacillus edaphicus and its mutants and increased potassium uptake by wheat. Can. J. Microbiol. 52: 66-72.
Crossref

 
 

Sheng XF, (2005). Growth promotion and increased potassium uptake of cotton and rape by a potassium releasing strain of Bacillus edaphicus. Soil Biol. Biochem. 37: 1918-1922.
Crossref

 
 

Sheng XF, He LY, Huang WY (2002). The conditions of releasing potassium by a silicate-dissolving bacterial strain NBT. AgricSci China, 1:662-666.

 
 

Sheng XF, Xia JJ, Chen J (2003). Mutagenesis of the Bacillus edphicaus Strain NBT and its effect on groth of chili and cotton. Agric. Sci. China, 2: 40-412.

 
 

Shiferaw B, Bantilan MCS, Serraj R (2004). Harnessing the potential of BNF for poor farmers: technological policy and institutional constraints and research need. In: Serraj R (ed) Symbiotic nitrogen fixation; prospects for enhanced application in tropical agriculture. Oxford & IBH, New Delhi. p. 3.

 
 

Shoebitz M, Ribaudo CM, Pardo MA, Cantore ML, Ciampi L, Curá JA (2009). Plant growth promoting properties of a strain of Enterobacterludwigiiisolated from Loliumperennerhizosphere. Soil Biol. Biochem. 41(9):1768-1774.
Crossref

 
 

Silva, J, Uchida, RS (eds). (2000). Plant Nutrient Management in Hawaii's Soils: Approaches for Tropical and Subtropical Agriculture. College of Tropical Agriculture and Human Resources, University of Hawaii at Manoa, Honolulu.

 
 

Singh G, Biswas DR, Marwah TS (2010). Mobilization of potassium from waste mica by plant growth promoting rhizobacteria and its assimilation by maize (Zea mays) and wheat (Triticum aestivum L.). J. Plant Nutr. 33:1236-1251.
Crossref

 
 

Sisworo WH, Mitrosuhardjo MM, Rasjid H, Myers RJK (1990). The relative roles of N fixation, fertilizer, crop residues and soil in supplying N in multiple cropping systems in a humid, tropical upland cropping system. Plant Soil 121:73-82.
Crossref

 
 

Snapp SS, Aggarwal VD, Chirwa RM (1998). Note on phosphorus and genotype enhancement of biological nitrogen fixation and productivity of maize/bean intercrops in Malawi. Field Crops Res. 58:205-212.
Crossref

 
 

Soliman S, Seeda MA, Aly SSM, Gadalla AM (1995). Nitrogen fixation by wheat plants as affected by nitrogen fertilizer levels and nonsymbiotic bacteria. Egypt J. Soil Sci. 35: 401-413.

 
 

Sturz AV, Christie BR, Novak J (2000). Bacterial endophytes: potential role in developing sustainable system of crop production. Crit. Rev. Plant Sci. 19:1-30.
Crossref

 
 

Tran Vân V, Berge O, Ke SN, Balandreau J, Heulin T (2000). Repeated beneficial effects of rice inoculation with a strain of Burkholderiavietnamiensison early and late yield components in low fertility sulphate acid soils of Vietnam. Plant Soil. 218:273-284.
Crossref

 
 

Vandamme P, Goris J, Chen WM, de Vos P, Willems A (2002). Burkholderiatuberum sp. nov and Burkholderiaphymatum sp. nov., nodulate the roots of tropical legumes. Syst. Appl. Microbiol. 25:507-512.
Crossref

 
 

Vasudevan P, PadmavathyV,Tewari N, Dhingra SC (2001). Biosorption of heavy metal ions. J. Sci. Ind. Res. 60:112-120.

 
 

Vessy JK (2003). Plant growth promoting rhizobacteria as biofertilizers. Plant and Soil. 255:571-586.
Crossref

 
 

Wagner SC (2012). Biological nitrogen fixation. Nature Education Knowledge. 3(10):15.

 
 

Walpola BC, Yoon MH (2012). Prospectus of phosphate solubilizing microorganisms and phosphorus availability in agricultural soils: A review. Afr. J. Microbiol. Res. 6(37):6600-6605.

 
 

Yanni YG, El-Fattah FKA (1999). Towards integrated biofertilization management with free living and associative dinitrogen fixers for enhancing rice performance in the Nile delta. Symbiosis 27:319-331.