International Journal of
Biotechnology and Molecular Biology Research

  • Abbreviation: Int. J. Biotechnol. Mol. Biol. Res.
  • Language: English
  • ISSN: 2141-2154
  • DOI: 10.5897/IJBMBR
  • Start Year: 2010
  • Published Articles: 105

Full Length Research Paper

Genetic diversity of sesame germplasm collection (SESAMUM INDICUM L.): implication for conservation, improvement and use

Dagmawi Teshome Woldesenbet*
  • Dagmawi Teshome Woldesenbet*
  • Ethiopian Institute of Agricultural Research, Pawe Agricultural Research Center, Benishangul Gumuz, Ethiopia.
  • Google Scholar
Kassahun Tesfaye
  • Kassahun Tesfaye
  • Addis Ababa University, College of Natural Science, Microbial, Cellular and Molecular Biology Department, Addis Ababa, Ethiopia.
  • Google Scholar
Endashaw Bekele
  • Endashaw Bekele
  • Addis Ababa University, College of Natural Science, Microbial, Cellular and Molecular Biology Department, Addis Ababa, Ethiopia.
  • Google Scholar


  •  Received: 19 November 2014
  •  Accepted: 02 February 2015
  •  Published: 28 February 2015

References

 

Abdellatef E, Sirelkhatem R, Mohamed A, Radwan KH, Khalafalla MM (2008). Study of genetic diversity in Sudanese sesame (Sesamum indicum L.) germplasm using random amplified polymorphic DNA (RAPD) markers. Afr J. Biotechnol. 7(24):4423-4427.

View

 
Aga E (2005). Molecular genetic diversity study of forest coffee tree (Coffea arabica L.) populations in Ethiopia: Implications for conservation and breeding. Doctoral Thesis, Faculty of Landscape Planning, Horticulture and Agricultural Science, Swedish University of Agricultural Sciences (SLU).
 
Ali GM, Yasumoto S, Seki-Katsuta M (2007). Assessment of genetic diversity in sesame (Sesamum indicum L.) detected by amplified fragment length polymorphism markers. Elect. J. Biotechnol. 10:1.
Crossref
 
Ashri A (1998). Sesame breeding. Plant Breed. Rev. 16:179-228.
 
Assefa K (2003). Phenotypic and molecular diversity in the Ethiopian cereal, Tef [Eragrostis tef (Zucc.) Trotter]. Doctoral Dissertation, Department of Crop Science, SLU. Acta Universitatis Agriculturae Sueciae. Agraria. p. 426.
 
Baker J (2001). Migration as a positive response to opportunity and context: the case of Welo, Ethiopia. In: Mobile Africa: changing patterns of movement in Africa and beyond. (Mirjam de, B., Rijk van, D., Foeken, D. ed.)
 
Barrett BA, Kidwell KK (1998). AFLP based genetic diversity assessment among wheat cultivars from the pacific northwest. Crop Sci. 38:1261-1271.
 
Bedigian D (1981). Origin, diversity, exploration and collection of sesame. In: Sesame: Status and Improvement, Proc. Expert Consultation, Rome, Italy, 8-12 December, 1980. FAO, Rome, Italy. pp. 164-169.
 
Bedigian D (2004). History and lore of sesame in Southwest Asia. Econ. Bot. 58:329-353.
Crossref
 
Blair MW, Panaud O, McCouch SR (1999). Inter-simple sequence repeat(ISSR) amplification for analysis of microsatellite motif frequency and fingerprinting in rice (Oryza sativa L.). Theor. Appl. Genet. 98:780-792.
Crossref
 
Bornet BC, Muller FP, Branchard M (2002). Highly informative nature of inter simple sequence repeat (ISSR) sequences amplified using triand tetra-nucleotide primers from DNA of cauliflower (Brassica oleracea var. 'botrytus' L.). Genome, 45:890-896.
Crossref
 
Borsch T, Hilu KW, Quandt D, Wilde V, Neinhuis C, Barthlott W (2003). Noncoding plastid trnT-trnF sequences reveal a well resolved phylogeny of basal angiosperms. J. Evol. Biol. 16:558-576.
Crossref
 
Brantestam AK, Bothmer RV, Dayteg C, Rashal I, Tuvesson S, Weibull J (2004). Inter simple sequence repeat analysis of genetic diversity and relationships in cultivated barley of Nordic and Baltic origin. Hereditas, 141(2):186-187.
Crossref
 
Caccone A (1985). Gene flow in cave arthropods: A qualitative and quantitative approach. Evol. 39:1223-1235.
Crossref
 
CSA (Central Statistic Authority) (2010). Ethiopian agricultural sample enumeration: Report on the primary results of area, production and yield of temporary crops of private peasant holdings in Meher Season, Addis Ababa, Ethiopia.
 

Edossa F, Kassahun T, Endashaw B (2007). Genetic diversity and population structure of Ethiopian lentil (Lens culinaris Medikus) landraces as revealed by ISSR marker. Afr. J. Biol. 6(12):1460-1468.

View

 

Edossa F, Kassahun T, Endashaw B (2010). A comparative study of morphological and molecular diversity in Ethiopian lentil landraces. Afr. J. Plant Sci. 4(7):241-254.

View

 
Endale D, Parzies Heiko K (2010). Genetic variability among landraces of sesame in ethiopia . Afr. Crop Sci. J. 19(1):1-13.
 
Excoffier L, Laval G, Schneider S (2006). Arlequin Version.3.01: An integrated software package for population genetics data analysis. Evol. Bioinform. Online 1:47-50.
 
FAO (2011). Food and Agricultural Organization. Rome, Italy.
Crossref
 
Gezahegn G (2007). Relationship between wild rice species of Ethiopian rice with cultivated rice based on ISSR marker. MSc Thesis Addis Ababa University.
 
Gilbert JE, Lewis RV, Wilkinson MJ, Kaligari PDS (1999). Developing an appropriate strategy to assess genetic variability in plant germplasm collections. Theor. Appl. Genet. 98:1125-1131.
Crossref
 
Godwin ID, Aitken AB, Smith LW (1997). Application of inter simple sequence repeat (ISSR) markers to plant genetics. Electrophor. 18:1524-1528.
Crossref
 
Hou YC, Yan ZH, Wei YM, Zheng YL (2005). Genetic diversity in barley from west China based on RAPD and ISSR analysis. Barley Genet. Newslett. 35:9-12.
 
Joseph MM, Bruce AM (1993). Gene flow in plant pathosystems. Ann. Rev. Phytopatol. 31:353-373.
Crossref
 
Joshi SP, Gupta VS, Aggarwal RK, Ranjekar PK, Brar DS (2000). Genetic diversity and phylogenetic relationship as revealed by inter simple sequence repeat (ISSR) polymorphism in the genus Oryza. Theor. Appl. Genet. 100:1311-1320.
Crossref
 
Kantety RV, Zeng X, Bennetzen JL, Brent EZ (1995). Assessment of genetic diversity in dent and popcorn (Zea mays L.) inbred lines using inter-simple sequence repeat (ISSR) amplification. Mol. Breed. 1:365-373.
Crossref
 
Kim DH, Zur G, Danin-Poleg Y, Lee SW, Shim KB, Kang CW, Kashi Y (2002). Genetic relationships of sesame germplasm collection as revealed by inter-simple sequence repeats. Plant Breed. 121:259-262.
Crossref
 
Laurentin HE, Karlovsky P (2006). Genetic relationship and diversity in a sesame (Sesamum indicum L.) germplasm collection using amplified fragment length polymorphism (AFLP). BMC Genet. 7:10.
Crossref
 
Mahajan RK, Bisht IS, Dhillon BS (2007). Establishment of a core collection of world sesame(Sesamum indicum l.) germplasm accessions. SABRAO J. Breed. Genet. 39(1):53-64.
 
Mehra KL (1967). Sesame in India. In: Oilseed Crops, Tropical Agriculture Series, (Weiss, E.A., ed.). Longman, London. pp. 282-340.
 
Pavlicek A, Hrda S, Flegr J (1999). Free tree free ware program for construction of phylogenetic trees on the basis of distance data and bootstrap/Jack Knife analysis of the tree robustness. Application in the RAPD analysis of genus Frenkelia. Folia Biol. 45:97-99.
 
Rohlf FJ (2004). NTSYS-pc ver 2.11T. Exter Software, Setauket, New York.
 
Saitou N, Nei M (1987). The neighbor-joining method: A new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4:406-425.
Pubmed
 
Seleshi A (2008). Genetic divergence and correlation study in sesame (Sesamim indicum L.) genotypes. MSc Thesis. Addis Ababa University.
 
Slatkin M (1981). Estimating levels of gene flow in natural populations. Genet. 99:323-335.
 

Slatkin M (1985). Rare alleles as indicators of gene flow. Evol. 39:53-65.
Crossref

Sneath PHA, Sokal RR (1973). Numerical Taxonomy. Freeman, Sanfrancisco
 

Studier JA, Keppler KL (1988). A note on the neighbor-joining algorithm of Saitou and Nei. Mol. Biol. Evol. 5:729-731.

Pubmed

 
Tadele A (2005). Sesame (Sesamum indicum L.) Research in Ethiopia: a Review of Past Work and Potential and Future Prospects. In: Sesame and Safflower Newsletter.(José Fernández Martínez, IAS, Córdoba, Spain. EcoPort version by Peter Griffee, FAO).
 
Tesfaye K (2006). Genetic diversity of wild Coffea arabica populations in Ethiopia as a contribution to conservation and use planning. Ecology and development series no. 44. Doctoral Thesis. University of Bonn, Germany.
 
Toan DP, Mulatu G, Tri MB, Tuyen CB, Arnulf M, Anders S (2011). Comparative analysis of genetic diversity of Sesame (Sesamum indicum L.) from Vietnam and Cambodia using agro-morphological and molecular markers. Hereditas 148(1):28-35.
Crossref
 
Waples RS (1987) A multispecies approach to the analysis of gene flow in marine shore fishes. Evol. 41:385-400.
Crossref
 
Weising K, Nybom H, Wolff K, Kahl G (2005). DNA Fingerprinting in Plants: Principles, Methods and Applications. Taylor and Francis Group, USA. 444pp.
Crossref
 
Weiss EA (1983). Oilseed Crops, Tropical Agriculture Series. Longman, London. pp. 282-340.
 
Wijnands JHM, Biersteker J, Van Loo EN (2009). Oilseeds business opportunities in Ethiopia 2009. Public private partnership in oil seed.
 
Wright S (1951). The genetical structure of populations. Ann. Eugenet. 15:323-354.
Crossref
 
Yang RC, Boyle TJB, Ye Z, Mao JX (1999). POPGENE, the user friendly shareware for population geneticss analysis, version 1.31, Molecular Biology and Biotechnology Centre, University of Aleberta, Canada.
 
Yeh FC, Yang RC, Boyle TJB, Ye Z, Mao JX (1999). POPGENE, the user friendly shareware for population geneticss analysis, version 1.31, Molecular Biology and Biotechnology Centre, University of Aleberta, Canada.
 
Zietkiewicz E, Rafalski A, Labuda D (1994). Genome fingerprinting by simple sequence repeat(SSR)- Anchored polymerase chain reaction amplification. Genomics 20:176-183.
Crossref