Full Length Research Paper
References
|
Adugna A (2014). Analysis of in situ diversity and population structure in Ethiopian cultivated Sorghum bicolor (L.) landraces using phenotypic traits and SSR markers. Springer Plus 3:212. |
|
|
Affre L, Utoit TD, Jagër M, Garraud L (2003). Écologie de la reproduction et de la dispersion, et structure génétique chez les espèces messicoles : propositions de gestion dans le Parc naturel régional du Luberon. B.R.G. 4:405-428. |
|
|
Arora A, Kundu S, Dilbaghi N, SharmaI, Tiwari R (2014). Population structure and genetic diversity among Indian wheat varieties using microsatellite (SSR) markers. Aust. J. Crop Sci. 8(9):1281-1289. |
|
|
Barcaccia G, Lucchin M, Parrini P (2003). Characterization of a flint maize (Zea mays var. indurata) Italian landrace, II. Genetic diversity and relatedness assessed by SSR and Inter-SSR molecular markers. Genet. Res. Crop Evol. 50:253-271. |
|
|
Bazile D, Martínez AE, Fuentes F (2014). Diversity of Quinoa in a Biogeographical Island: a Review of Constraints and Potential from Arid to Temperate Regions of Chile. Not. Bot. Horti. Agrobo. 42(2):289-298. |
|
|
Bogyo TP, Porceddu E, Perrino P (1980). Analysis of sampling strategies for collecting genetic material. Econ. Bot. 34:160-174. |
|
|
Brown (1979). Enzyme polymorphism in plant populations. Theor. Pop. Biol. 15:l-42. |
|
|
Chen ZW, Lu RJ, Zou L, Du ZZ, Gao RH, He T, Huang JH (2012). Genetic diversity analysis of barley landraces and cultivars in the Shanghai region of China. Genet. Mol. Res. 11(1):644-650. |
|
|
Chin EC, Senior ML, Shu H, Smith JS (1996). Maize simple repetitive DNA sequences: abundance and allele variation. Genome 39:866-873. |
|
|
Danjuma MN, Mohammed S (2014). Genetic diversity of Pearl Millet (Pennisetum typhoides) cultivars in semi-arid northern Nigeria. J. Nat. Sci. Res. 4(22):34-42. |
|
|
Earl DA, VonHoldt BM (2012). STRUCTURE HARVESTER: a website and program for visualizing STRUCTURE output and implementing the Evanno method. Conserv. Genet. Resour. 4(2):359-361. |
|
|
Eloi IBO, Mangolin CA, Scapim CA, Gonçalves CS, Machado MFPS (2012). Selection of high heterozygosity popcorn varieties in Brazil based on SSR markers. Genet. Mol. Res. 11(3):1851-1860. |
|
|
Evanno G, Regnaut S, GoudetJ (2005). Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study. Mol. Ecol. 14:2611-2620. |
|
|
Excoffier L, Laval G, Schneider S (2005). Arlequin ver. 3.0: An integrated software package for population genetics data analysis. Evol. Bioinform. 1:47-50. |
|
|
Falush D, Stephens M, Pritchard JK (2003). Inference of population structure using multilocus genotype data: Linked loci and correlated allele frequencies. Genet. 164 (4):1567-1587. |
|
|
FAOSTAT (2015). Statistical database of the food and agriculture of the United Nations. |
|
|
Foulley JL, Ollivier L (2006). Diversité génétique et richesse allélique : concepts et application à des races bovines. In : Treizièmes rencontres autour des recherches sur les ruminants, 6-7 décembre 2006, Paris, France, pp. 227-230. |
|
|
Goudet J (2002). FSTAT, a program to estimate and test gene diversities and fixation indices (version 2.9.3.2). |
|
|
Hammer K, Teklu Y (2008). Plant Genetic Resources: Selected Issues from Genetic Erosion to Genetic Engineering. JARDTS 109(1):15-50. |
|
|
Hamrick JL, Godt JW (1997). Allozyme diversity in cultivated crops. Crop Sci. 37:26-30. |
|
|
Hoxha S, Shariflou MR, Sharp P (2004). Evaluation of genetic diversity in Albanian maize using ssr markers. Maydica 49:97-103. |
|
|
Jain R, Bharadwaj DN (2014). Heterosis and inbreeding depression for grain yield and yield contributing characters in quality protein maize. Agric. Commun. 2(1):8-16. |
|
|
Jia G, Shi S, Wang C, Niu Z, Chai Y, Zhi H, Diao X (2013). Molecular diversity and population structure of Chinese green foxtail [Setaria viridis (L.) Beauv.] revealed by microsatellite analysis. J. Exp. Bot. 64(12): 3645-3656. |
|
|
Kostova AR, Todorovska EG, Christov NK, Sevov VA, Genov, MN, Vulchinkov SV, Atanassov AI (2007). Assessing the genetic diversity of Bulgarian maize Germplasm using microsatellite markers. Maydica 52:251-255. |
|
|
Kumbhar SD, Kulwa PL, Patil JV, Sarawate CD, G Aikwad AP, Jadhav AS (2015). Genetic Diversity and Population Structure in Landraces and Improved Rice Varieties from India. Rice Sci. 22(3):99-107. |
|
|
Legesse BW, Myburg AA, Pixley KV, Botha AM (2007). Genetic diversity of African maize inbred lines revealed by SSR markers. Heredity 144:10-17. |
|
|
Levene H (1949). On a matching problem in genetics. Ann. Math. Statist. 20:91-92. |
|
|
Lischer HEL, Excoffier L (2012). PGDSpider: An automated data conversion tool for connecting population genetics and genomics programs. Bioinform. 28:298-299. |
|
|
Liu Ke, Goodman M, Muse S, Smith JS, Buckler E, Doebley J (2003). Genetic structure and diversity among maize inbred lines as inferred from DNA microsatellites. Genet. 165:2117-2128. |
|
|
Maize GDB (2016). Maize Genetics and Genomics Database. |
|
|
Matsuoka Y, Vigouroux Y, Goodman MM, Sanchez J, Buckler E, Doebley J (2002). A single domestication for maize shown by multilocus microsatellite genotyping. Proc. Natl. Acad. Sci. USA 99:6080-6084. |
|
|
Mondini L, Noorani A, Pagnotta MA (2009). Assessing Plant Genetic Diversity by Molecular Tools. Diversity 1:19-35. |
|
|
Nei M (1975). Molecular population genetics and evolution. In: Neuberger A & Tatum EL, editors. Frontiers of biology, Vol. 40. North Holland, Amsterdam-Oxford, Netherlands pp. 288. |
|
|
Newton CA, Graham GA (1997). PCR. 2nd edn. Springer-Verlag, New York, pp. 192. |
|
|
N'guyen TV, Doan TTB, Leo AE, Bui CM, Taylor PWJ, Ford R (2012). Application of microsatellite markers to fingerprint and determine the representational diversity within recently established elite maize inbred line breeding program. J. Agric. Sci. 4(6):258-266. |
|
|
Nybom H (2004). Comparison of different nuclear DNA markers for estimating intraspecific genetic diversity in plants. Mol. Ecol. 13:1143-1155. |
|
|
Oppong A, Bedoya CA, Ewool MB, Asante MD, Thompson RN, Adu-Dapaah H, Lamptey JNL, Ofori K, Offei SK, Warburton ML (2014). Bulk genetic characterization of Ghanaian maize landraces using microsatellite markers. Maydica 59:1-8. |
|
|
Oosterhout CV, Hutchinson WF, Wills DPM, Shipley P (2004). Micro-checker: software for identifying and correcting genotyping errors in microsatellite data. Mol. Ecol. Notes 4:535-538. |
|
|
Park JS, Park JY, Park KJ, Lee JK (2008). Genetic diversity among waxy corn accessions in Korea revealed by microsatellite markers. Korean J. Breed. Sci. 40(3):250-257. |
|
|
Peakall R, Smouse PE (2006). GENALEX 6: genetic analysis in Excel. Population genetic software for teaching and research. Mol. Ecol. Notes 6:288-295. |
|
|
Pineda-Hidalgo KV, Méndez-Marroquín KP, Alvarez EV, Chávez-Ontiveros J, Sánchez-Pe-a P, Garzón-Tiznado JA, Vega-GarcíaMO, López-Valenzuela JA (2013). Microsatellite-based genetic diversity among accessions of maize landraces from Sinaloa in México. Hereditas 150:53-59. |
|
|
Pressoir G, Berthaud J (2004). Patterns of population structure in maize landraces from the central valleys of Oaxaca in Mexico. Heredity 92:88-94. |
|
|
Pritchard JK, Stevens M, Donnelly P (2000). Inference of population structure using multilocus genotype data. Genet. 155:945-959. |
|
|
Qi-Lun Y, Ping F, Ke-Cheng K, Guang-Tang P (2008). Genetic diversity based on SSR markers in maize (Zea mays L.) landraces from Wu ling mountain region in China. J. Genet. 87(3):287-291. |
|
|
Rupp JV, Mangolin CA, Scapim CA, Pires da Silva Machado MF (2009). Genetic structure and diversity among sweet corn (su1-germplasm) progenies using ssr markers. Maydica 54:125-132. |
|
|
Senior ML, Murphy JP, Goodman MM, Stuber CW (1998). Utility of SSRs for determining genetic similarities and relationships in maize using an agarose gel system. Crop Sci. 38:108-1098. |
|
|
Van Heerwaarden, J, Ross-Ibarra J, Doebley J, Glaubitz JC, Sanchez Gonzalez JD, Gaut BS, Eguiarte LE (2010). Fine scale genetic structure in the wild ancestor of maize (Zea mays ssp. parviglumis). Mol. Ecol. 19:1162-1173. |
|
|
Wanjala BW, Obonyo M, Wachira FN, Muchugi A, Mulaa M, Harvey J, Skilton RA, Proud J, Hanson J (2013). Genetic diversity in Napier grass (Pennisetumpurpureum) cultivars: implications for breeding and conservation. AoB PLANTS 5:1-10. |
|
|
Warburton ML, X Xianchun, J Crossa, J Franco, AE Melchinger, M Frisch, M Bohn, D Hoisingto (2002). Genetic characterization of CIMMYT inbred maize lines and open pollinated populations using large scale fingerprinting methods. Crop Sci. 42:1832-1840. |
|
|
Warburton ML, P Setimela, J Franco, H Cordova, K Pixley, M Bänziger, S Dreisigacker, C Bedoya, J Mac Robert (2010). Toward a cost-effective fingerprinting methodology to distinguish maize open-pollinated varieties. Crop Sci. 50:1-11. |
|
|
Wasala SK, Prasanna BM (2013). Microsatellite marker-based diversity and population genetic analysis of selected lowland and mid-altitude maize landrace accessions of India. J. Plant Biochem. Biotechnol. 22(4):392-400. |
|
|
Weir BS, Cockerham CC (1984). Estimating F-statistics for the analysis of population structure. Evolution 38:1358-1370. |
|
|
Wright S (1978). Variability Within and Among Natural Populations. In: Wright S, editor. Evolution and the Genetics of Population. University of Chicago Press, Chicago P 580. |
|
|
Yang X, Gao S, Xu S, Zhang Z, Prasanna BM, Li L, Li J, Yan J (2011). Characterization of a global germplasm collection and its potential utilization for analysis of complex quantitative traits in maize. Mol. Breed. 28:511-526. |
|
|
Yao Q, Yang K, Pan G, Rong T (2007). Genetic diversity of maize (Zea mays L.) landraces from southwest China based on SSR data. J. Genet. Genomics 34(9):851-860. |
|
|
Yeh FC, Yang R, Boyle T (1999). POPGENE Version 1.32. Microsoft windows-based freeware for population genetic analysis. University of Alberta, Centro for International Forestry Research, Edmonton. |
|
|
Yu Y, Wang R, Shi Y, Song Y, Wang T, Li Y (2007). Genetic diversity and structure of the core collection for maize inbred lines in china. Maydica 52:181-194. |
|
Copyright © 2024 Author(s) retain the copyright of this article.
This article is published under the terms of the Creative Commons Attribution License 4.0
