African Journal of
Biotechnology

  • Abbreviation: Afr. J. Biotechnol.
  • Language: English
  • ISSN: 1684-5315
  • DOI: 10.5897/AJB
  • Start Year: 2002
  • Published Articles: 12487

Full Length Research Paper

Genetic diversity analysis among soybean genotypes using SSR markers in Uganda

Clever Mukuze
  • Clever Mukuze
  • Department of Agricultural Production, School of Agricultural Sciences, College of Agriculture and Environmental Sciences (CAES), Makerere University, P. O. Box 7062, Kampala, Uganda.
  • Google Scholar
Phinehas Tukamuhabwa
  • Phinehas Tukamuhabwa
  • Department of Agricultural Production, School of Agricultural Sciences, College of Agriculture and Environmental Sciences (CAES), Makerere University, P. O. Box 7062, Kampala, Uganda.
  • Google Scholar
Mcebisi Maphosa
  • Mcebisi Maphosa
  • Department of Crop and Soil Science, Faculty of Agricultural Sciences, Lupane State University, P.O. Box 170, Lupane, Zimbabwe.
  • Google Scholar
Shorai Dari
  • Shorai Dari
  • Department of Crop Science, Faculty of Agriculture, University of Zimbabwe, P.O. Box MP167, Mt Pleasant, Harare, Zimbabwe.
  • Google Scholar
Isaac Onziga Dramadri
  • Isaac Onziga Dramadri
  • Makerere University Regional Center for Crop Improvement (MaRCCI), CAES, Makerere University, P. O. Box, 7062, Kampala, Uganda.
  • Google Scholar
Tonny Obua
  • Tonny Obua
  • Department of Agricultural Production, School of Agricultural Sciences, College of Agriculture and Environmental Sciences (CAES), Makerere University, P. O. Box 7062, Kampala, Uganda.
  • Google Scholar
Hellen Kongai
  • Hellen Kongai
  • Department of Agricultural Production, School of Agricultural Sciences, College of Agriculture and Environmental Sciences (CAES), Makerere University, P. O. Box 7062, Kampala, Uganda.
  • Google Scholar
Patrick Rubaihayo
  • Patrick Rubaihayo
  • Department of Agricultural Production, School of Agricultural Sciences, College of Agriculture and Environmental Sciences (CAES), Makerere University, P. O. Box 7062, Kampala, Uganda.
  • Google Scholar


  •  Received: 08 May 2020
  •  Accepted: 06 July 2020
  •  Published: 31 July 2020

References

Anderson JA, Churchill GG, Autrique JE, Tanksley SD, Sorrells ME (1993). Optimizing parental selection for genetic linkage maps. Genome 36(1):181-186.
Crossref

 

Bisen A, Khare D, Nair P, Tripathi N (2015). SSR analysis of 38 genotypes of soybean (Glycine max (L.) Merr.) genetic diversity in India. Physiology and Molecular Biology of Plants 21(1):109-115.
Crossref

 
 

Chakraborty S, Patel DA, Parmar H, Dhaduk HL, Sasidharan N (2018). Genetic diversity analysis in soybean (Glycine max (L.) Merrill.) using SSR markers. Journal of Pharmacognosy and Phytochemistry 7(3):2380-2384.

 
 

Chauhan DK, Bhat JA, Thakur AK, Kumari S, Hussain Z, Satyawathi CT (2015). Molecular characterization and genetic diversity assessment in soybean [Glycine max (L.) Merr.] varieties using SSR markers. Indian Journal of Biotechnology 504-510.

 
 

Cregan PB, Jarvik T, Bush AL, Shoemaker RC, Lark KG, Kahler AL, Specht JE (1999). An integrated genetic linkage map of the soybean genome. Crop Science 39:1464-1490.
Crossref

 
 

Ghosh J, Ghosh PD, Choudhury PR (2014). An assessment of genetic relatedness between soybean [Glycine max (L.) Merrill] cultivars using SSR markers. American Journal of Plant Sciences 05(20):3089-3096.
Crossref

 
 

Gupta SK, Manjaya JG (2017). Genetic diversity and population Structure of indian soybean [Glycine max (L.) Merrill.] revealed by simple sequence repeat markers. Journal of Crop Science and Biotechnology 10:221-222.
Crossref

 
 

Hipparagi Y, Singh R, Choudhury DR, Gupta V (2017). Genetic diversity and population structure analysis of Kala bhat (Glycine max (L.) Merrill) genotypes using SSR markers. Hereditas 154:9.
Crossref

 
 

Ibanda AP, Karungi J, Malinga GM, Adjumati G (2018). Influence of environment on soybean [Glycine max (L.) Merr.] resistance to groundnut leaf miner, [(Aproaerema modicella (Deventer)] in Uganda. Journal of Plant Breeding and Crop Science 10(12):336-346.
Crossref

 
 

Khare D, Bisen A, Nair P, Tripathi N (2013). Genetic diversity in soybean germplasm identified by RAPD markers. Asia-Pacific Journal of Molecular Biology and Biotechnology 21(3):114-120.

 
 

Koutu GK, Shrivastava A, Singh Y, Tiwari S (2019). Molecular characterization and genetic diversity assessment of soybean varieties using SSR markers. International Journal of Current Microbiology and Applied Science 8(04):173-182.
Crossref

 
 

Kujane K, Sedibe MM, Mofokeng A (2019). Genetic diversity analysis of soybean (Glycine max ( L .) Merrill.) genotypes making use of SSR markers. Australian Journal of Crop Science 13(07):1113-1119.
Crossref

 
 

Kumawat G, Singh G, Gireesh C, Shivakumar M (2015). Molecular characterization and genetic diversity analysis of soybean (Glycine max ( L.) Merrill.) germplasm accessions in India. Physiology and Molecular Biology 21(1):101-107.
Crossref

 
 

Li Y, Guan R, Liu Z, Ma Y, Wang L, Li L, Qiu L (2008). Genetic structure and diversity of cultivated soybean (Glycine max (L.) Merr.) landraces in China. Theoretical and Applied Genetics 117(6):857-871.
Crossref

 
 

Maughan PJ, Maroof MAS, Buss GR (1995). Microsatellite and amplified sequence length polymorphisms in cultivated and wild soybean. Genome 38(4):715-723.
Crossref

 
 

Moniruzzaman M, Saiem RM, Emon RM, Haque MS, Saha NR, Malek MA, Khatun K (2019). Genetic diversity analysis of soybean genotypes using SSR markers for salinity tolerance. Progressive Agriculture 3030(1):1-9.
Crossref

 
 

Msiska UM, Hailay MG, Miesho BW, Ibanda AP, Tukamuhabwa P, Kyamanywa S, Rubaihayo P (2018). Genetics of resistance in F2 soybean populations for adzuki bean bruchid (Callosobruchus chinensis). Journal of Agricultural Science 10(12):1916-9752.
Crossref

 
 

Namara M (2015). Resistance of soybean germplasm to the groundnut leaf miner (Aproaerema modicella) in Uganda. RUFORUM. 

View

 
 

Narvel JM, Fehr WR, Chu W, Grant D, Shoemaker RC (2000). Simple sequence repeat diversity among soybean plant introductions and elite genotypes. American Crop Science 40:412-441.
Crossref

 
 

Oda MC, Sediyama T, Matsuo É, Cruz CD, Barros EG (2015). Phenotypic and molecular traits diversity in soybean launched in forty years of genetic breeding. Agronomy Science and Biotechnology 1(1):1-9.
Crossref

 
 

Peakall R, Smouse PE (2012). GenAIEx V5 : Genetic Analysis in Excel. Populations genetic software for teaching and research GenAlEx 6.5 : genetic analysis in Excel. Population genetic software for teaching and research. Oxford Jounals:Bioinformatics 28(19):2537-2539.
Crossref

 
 

Perrier X, Jacquemoud-Collet JP (2006). DARwin software 

View

 
 

Song Q, Jia G, Grant D, Nelson RT (2010). Abundance of SSR motifs and development of Candidate Polymorphic SSR markers in Soybean. Crop Science 50:1950-1960.
Crossref

 
 

Song JY, Piao X, Choi Y, Lee G, Chung J, Lee J, Lee MC (2013). Evaluation of genetic diversity and comparison of biochemical traits of soybean (Glycine max L.) germplasm collections. Journal of Plant Breeding and Biotechnology 1(4):374-384.
Crossref

 
 

Ssendege G, Obua T, Kawuki R, Maphosa M, Tukamuhabwa TP (2015). Soybean genetic diversity and resistance to soybean rust disease in Uganda. Agricultural Journal 10(3-6):17-23.

 
 

Tantasawat P, Trongchuen J, Prajongjai T, Jenweerawat S, Chaowiset W (2011). SSR analysis of soybean (Glycine max (L.) Merr.) genetic relationship and variety identification in Thailand. Australian Journal of Crop Science 5(3):283-290.

 
 

Tukamuhabwa P, Assimwe M, Nabasirye M, Kabayi P, Maphosa M (2012). Genotype by environment interaction of advanced generation soybean lines for grain yield in Uganda. African Crop Science Journal 20(2):107-115.

 
 

Tukamuhabwa P, Obaa B, Obua T, Namara M, Okii D, Kabayi P (2016). Status of soybean production and impact indicators of new soybean varieties in Uganda 1-30.

 
 

Tukamuhabwa P, Obua T (2015). Soybean production guide in Uganda, Makerere University Agricultural Research Institute, Kabanyolo (MUARIK), Makerere University, Kampala.

 
 

Tukamuhabwa P, Oloka HK (2016). Soybean research and development in Uganda: A case of paradigm shift in an African University. Makerere University Agricultural Research Institute, Kabanyolo (MUARIK), Makerere University, Kampala.

 
 

Wang M, Run-zhi L, Wan-ming Y, Wei-jun D (2010). Assessing the genetic diversity of cultivars and wild soybeans using SSR markers. African Journal of Biotechnology 9(31):4857-4866.

 
 

Wang YH, Zhang XJ, Fan SJ (2015). Genetic diversity of wild soybean populations in Dongying, China, by simple sequence repeat analysis. Genetics and Molecular Research 14(3):11613-11623.
Crossref

 
 

Widaningsih NA, Purwanto E, Nandariyah N, Reflinur R (2014). The Use of DNA Microsatellite markers for genetic diversity identification of soybean (Glycine max (L) Merrill .) as a supplementary method in reference collections management. Indonesian Journal of Biotechnology 19(2):136-145.
Crossref

 
 

Zhang G, Xu S, Mao W, Hu Q, Gong Y (2013). Determination of the genetic diversity of vegetable soybean [Glycine max (L.) Merrill.] using EST-SSR markers. Biomedical and Biotechnology 14(4):279-288.
Crossref

 
 

Zhao H, Wang Y, Xing F, Liu X, Yuan C, Qi G, Dong Y (2018). The genetic diversity and geographic differentiation of the wild soybean [Glycine soja (L.) Merrill.] in Northeast China based on nuclear microsatellite variation. International Journal of Genomics 508:1-9.
Crossref