African Journal of
Microbiology Research

  • Abbreviation: Afr. J. Microbiol. Res.
  • Language: English
  • ISSN: 1996-0808
  • DOI: 10.5897/AJMR
  • Start Year: 2007
  • Published Articles: 5233

Full Length Research Paper

The frequency of Escherichia coli (EPEC, ETEC, EIEC and serotypes) shigella, rotavirus and parasite agents among children with acute gastroenteritis in Southeast Anatolia, Turkey

Mine TURHANOGLU1*, Serda GULSUN2, Arzu ONUR1 and Fulya BÄ°LMAN1
1Department of Microbiology, Diyarbakir Education and Research Hospital, Diyarbakir, Turkey. 2Department of Infectious Diseases and Clinical Microbiology, Diyarbakir Education and Research Hospital, Diyarbakir, Turkey.
Email: [email protected]

  •  Accepted: 25 May 2012
  •  Published: 21 June 2012

Abstract

This study analyzed a host of parasite agents and bacterial viruses in 1,079 children aged 0 to 5 years suffering from diarrhea between 2004 and 2008. Enteric pathogens were detected in 767 (71%) infected patients and 456 control patients. Enteric pathogens were isolated from 41 (8.9%) of the infected patients. Isolated pathogens responsible for gastroenteritis were as follows: Rotavirus 282 (26.1%), Shigella 19 (1.7%), enteropathogenic Escherichia coli 153 (60.9%), entero-invasive E. coli 30 (11.9%) and enterotoxigenic E. coli 68 (27%). Among the E. coli serotypes; O111:K58:B4, 055:K59:B5, 0127:K63:B8:, 026:K60:B17, 124:K72:B17, 0125:K70:B15 were found in 48, 39, 29, 19, 9 and 5 (19.1, 15.5, 11.5, 7.5, 3.5 and 1.9%) of the cases, respectively. In two of the infected patients, both 128:K67:B12 and 0112:K66:B11 types were isolated together. Also, 0112:K66:B11 and 0128:K67:B12 types were isolated together only in two cases. Rotavirus was detected by enzyme immunoassay (EI) and rapid latex agglutination (LA) test in 26.1% of the fecal specimens from 1,079 children who had acute diarrhea and 4.3% of the fecal specimens of the 250 healthy controls. Infections were detected most commonly in children aged 0 to 2 months (54.8%). In the identification of rotavirus, the two methods, LA and EI were also compared. In diarrheal fecal samples, Entamoebae histolytica was found in 25.4% and Giardia lamblia was found in 18.4% patients.

 

Key words: Gastroenteritis, enteropathogens, rotavirus.