African Journal of
Microbiology Research

  • Abbreviation: Afr. J. Microbiol. Res.
  • Language: English
  • ISSN: 1996-0808
  • DOI: 10.5897/AJMR
  • Start Year: 2007
  • Published Articles: 5233

Full Length Research Paper

Evaluation of different deoxyribonucleic acid (DNA) extraction methods using dried blood spot for early infant diagnosis of HIV1 in Sub-Saharan Africa

Ceffa Susanna1*, Erba Fulvio2, Brambilla Davide3, Luhanga Richard4, Armel Pépé Mamy5, Paturzo Giovanna1, Nielsen-Saines Karin6, Mancinelli Sandro3, Narciso Pasquale7, Palombi Leonardo3 and Marazzi Maria Cristina8
  1Community of Sant'Egidio, Rome, Italy. 2Department of Experimental Medicine and Biochemical Science, University of Tor Vergata, Rome, Italy. 3Department of Public Health, University of Tor Vergata, Rome, Italy. 4Drug Resources Enhancement against AIDS and Malnutrition (DREAM) Program, Blantyre, Malawi. 5Drug Resources Enhancement against AIDS and Malnutrition (DREAM) Program, Conakry, Guinea. 6Department of Pediatrics, David Geffen UCLA School of Medicine Los Angeles USA. 7Istituto Nazionale Malattie Infettive (INMI), Rome, Italy. 8Libera Università degli Studi Maria SS. Assunta (LUMSA) University, Rome, Italy.
Email: [email protected]

  •  Accepted: 09 February 2012
  •  Published: 19 July 2012

Abstract

 

Mother-to-child transmission leads to death of 50% of infected children in the first 2 years of life. Early diagnosis is essential for timely treatment. Dried blood spots (DBS) collected on filter paper provide a simple approach for sample collection especially in resource limited settings, because storage and shipment are very easy. The aim of the study was to standardize reproducible, affordable and not expensive deoxyribonucleic acid (DNA) extraction procedures. 146 samples were collected in the context of DREAM Program activity (Drug Resources Enhancement against AIDS and Malnutrition), a large public health programme in Africa to treat AIDS, and nine experimental methods were compared with the HIV-DNA extraction from whole blood using Amplicor HIV-1 DNA Roche Molecular Systems. The results obtained demonstrates that it is possible to extract DNA form DBS using a Chelex resin based method with comparable efficiency to that of a commercial standardized kit, as Qiagen, decreasing test costs by about 50% and with an excellent correlation with whole blood extraction.

 

Keys words: Early infant diagnosis, human immunodeficiency virus type 1 (HIV-1), dried blood spots (DBS), extraction.