African Journal of
Microbiology Research

  • Abbreviation: Afr. J. Microbiol. Res.
  • Language: English
  • ISSN: 1996-0808
  • DOI: 10.5897/AJMR
  • Start Year: 2007
  • Published Articles: 5233

Full Length Research Paper

Characterization of Fusarium oxysporum isolates from tomato plants in Algeria

Abdesselem Si Mohammed
  • Abdesselem Si Mohammed
  • Laboratory of Applied Microbiology (LMA), Department of Biology, Faculty of Sciences of Nature and Life, University of Oran 1 Ahmed Ben Bella, B.P. 1524, El M’Naouer, 31000 Oran, Algeria.
  • Google Scholar
Nisserine Hamini Kadar
  • Nisserine Hamini Kadar
  • Laboratory of Applied Microbiology (LMA), Department of Biology, Faculty of Sciences of Nature and Life, University of Oran 1 Ahmed Ben Bella, B.P. 1524, El M’Naouer, 31000 Oran, Algeria.
  • Google Scholar
Mebrouk Kihal
  • Mebrouk Kihal
  • Laboratory of Applied Microbiology (LMA), Department of Biology, Faculty of Sciences of Nature and Life, University of Oran 1 Ahmed Ben Bella, B.P. 1524, El M’Naouer, 31000 Oran, Algeria.
  • Google Scholar
Jamal Eddine Henni
  • Jamal Eddine Henni
  • Laboratory of Applied Microbiology (LMA), Department of Biology, Faculty of Sciences of Nature and Life, University of Oran 1 Ahmed Ben Bella, B.P. 1524, El M’Naouer, 31000 Oran, Algeria.
  • Google Scholar
José Sanchez
  • José Sanchez
  • Botany Unit, Department of Biology and Geology, University of Almeria, E-04120 Almeria, Spain.
  • Google Scholar
Eduardo Gallego
  • Eduardo Gallego
  • Botany Unit, Department of Biology and Geology, University of Almeria, E-04120 Almeria, Spain.
  • Google Scholar
José Antonio Garrido-Cardenas
  • José Antonio Garrido-Cardenas
  • Nucleic Acids Analysis Service, Research Central Services, University of Almeria, E-04120 Almeria, Spain.
  • Google Scholar


  •  Received: 17 June 2016
  •  Accepted: 26 July 2016
  •  Published: 14 August 2016

References

Altschul SF, Madden TL, Schäffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ (1997). Gapped BLAST and PSI-BLAST: A new generation of protein database search programs. Nucleic Acids Res. 25:3389-3402.
Crossref

 

Beckman CM (1987). The nature of wilt disease. APS Press. St Paul. Minnesota. USA. 175 p.

 
 

Benhamou N, Rey P, Cherif M, Hockenhul J, Tirilly Y (1997). Treatment with the mycoparasite Pythium oligandrum triggers induction of defence-related reactions in tomato roots when challenged with Fusarium oxysporum f. sp. radicis-lycopersici. Phytopathology 87:108-121.
Crossref

 
 

Booth C (1971). The genus Fusarium. Commonwealth Mycological Institute. Kew. Surrey. England. p237.

 
 

Davet P, Rouxel F (1997). Détection et isolement des champignons du sol. INRA. Paris. France. p203.

 
 

Di Primo P, Cartia G, Katan T (2001). Vegetative compatibility and heterokaryon stability in Fusarium oxysporum f.sp. radicis-lycopersici from Italy. Plant. Pathol. 50:371-382.
Crossref

 
 

Edel-Hermann V, Gautheron N, Steinberg C (2011). Genetic diversity of Fusarium oxysporum and related species pathogenic on tomato in Algeria and other Mediterranean countries. Plant. Pathol. 61:787-800.
Crossref

 
 

FAO (2013). Food and agriculture organization of the United Nations: statistics division. 

View. Retrieved 25 January 2015.

 
 

Geiser DM, Jimenez-Gasco M, Kang S, Makalowska I, Veeraraghavan N, Ward TJ, Zhang N, Kuldau GA, O'Donnell K (2004). FUSARIUM-ID v. 1.0: A DNA sequence database for identifying Fusarium. Eur. J. Plant. Pathol. 110:473-479.
Crossref

 
 

Gerlach W, Nirenberg HI (1982). The genus Fusarium: a pictorial atlas. Mitt. Biol. Bundesanst. Ld. u. Forstw. Berlin-Dahlem. 209:1-406.

 
 

Harrow SA, Ferrokhi-Nejad R, Pitman AR, Scott IAW, Bentley A, Hide C, Cromey MG (2010). Characterization of New Zealand Fusarium populations using a polyphasic approach differentiates the F. avenaceum/F. acuminatum/F. tricinctum species complex in cereal and grassland systems. Fungal. Biol. 114:293-311.
Crossref

 
 

Jarvis WR (1988). Fusarium crown and root rot of tomatoes. Phytoprotection. 69:49-64.

 
 

Jarvis WR, Dirks VA, Johnson PW, Thorpe HJ (1977). No interaction between root knot nematode and Fusarium foot and root rot of greenhouse tomato. Plant. Dis. Rep. 61:251-254.

 
 

Jarvis WR, Shoemaker RA (1978). Taxonomic status of Fusarium oxysporum causing foot and root rot of tomato. Phytopathology. 68:1679-1680.
Crossref

 
 

Kim JT, Park IH, Hahm YL, Yu SH (2001). Crown and root rot of greenhouse tomato caused by Fusarium oxysporum f. sp. radicis-lycopersici in Korea. Plant. Pathol. J. 17:290-294.

 
 

Koike ST, Gladders P, Paulus AO (2006). Vegetable diseases: A color handbook. Academic Press. Elsevier. London. UK. 320 p.
Crossref

 
 

Kristensen R, Torp M, Kosiak B, Holst-Jensen A (2005). Phylogeny and toxigenic potential is correlated in Fusarium species as revealed by partial translation elongation factor 1 alpha gene sequences. Mycol. Res. 109:173-186.
Crossref

 
 

Kumar S, Dudley J, Nei M, Tamura K (2008). MEGA: A biologist-centric software for evolutionary analysis of DNA and protein sequences. Brief. Bioinform. 9:299-306.
Crossref

 
 

Leslie JF, Summerell BA (2006). The Fusarium laboratory manual. Blackwell Publishing. Iowa. USA. 388 p.
Crossref

 
 

Mc Ginnis S, Madden TL (2004). BLAST: At the core of a powerful and diverse set of sequence analysis tools. Nucleic. Acids. Res. 32:20-25.
Crossref

 
 

Menzies JG, Jarvis WR (1994). The infestation of tomato seed by Fusarium oxysporum f. sp. radicis-lycopersici. Plant. Pathol. 43:378-386.
Crossref

 
 

Nelson PE, Tousson TA, Marasas WFO (1983). Fusarium species: An illustrated manual for Identification. Pennsylvania State University Press. University Park. PA. USA. 206 p.

 
 

Nutter FW, Warren CG, Wells OS, MacHardy WE (1978). Fusarium foot and root rot of tomato in New Hampshire. Plant. Dis. Rep. 62:976-978.

 
 

O'Donnell K, Kistler HC, Cigelnik E, Ploetz RC (1998). Multiple evolutionary origins of the fungus causing Panama disease of banana: Concordant evidence from nuclear and mitochondrial gene genealogies. Proc. Natl. Acad. Sci. USA. 95:2044-2049.
Crossref

 
 

Rapilly F (1968). Les techniques de mycologie en pathologie végétale. Ann. Epiphyt. INRA. Paris. France. 102 p.

 
 

Rowe RC, Farley JD, Colpin DL (1977). Air-borne spore dispersal and recolonization of steamed soil Fusarium oxysporum in tomato greenhouse. Phytopathology 67:1513-1517.
Crossref

 
 

Snyder WC, Hansen HN (1940). The species concept in Fusarium. Am. J. Bot. 27:64-67.
Crossref

 
 

Song W, Zhou L, Yang C, Cao X, Zhang L, Liu X (2004). Tomato Fusarium wilt and its chemical control strategies in a hydroponic system. Crop. Prot. 23:243-247.
Crossref

 
 

Steinkellner S, Mammerler R, Vierheilig H (2005). Microconidia germination of the tomato pathogen Fusarium oxysporum in the presence of root exudates. J. Plant. Inter. 1:23-30
Crossref

 
 

Tamura K, Stecher G, Peterson D, Filipski A, Kumar S (2013). MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0. Mol. Biol. Evol. 30:2725-2729.
Crossref

 
 

Vakalounakis DJ, Fragkiadakis GA (1999). Genetic diversity of Fusarium oxysporum isolates from cucumber: Differentiation by pathogenicity, vegetative compatibility and RAPD fingerprinting. Phytopathology 89:161-168.
Crossref

 
 

Yamamoto I, Komada H, Kuniyasu K, Saito M, Ezuka A (1974). A new race of Fusarium oxysporum f. sp. lycopersici inducing root rot of tomato. Proc. Kansai. Plant. Prost. Soc. 16:17-29.

 
 

Yli-Matilla T, Paavaeen-Huhtala S, Bulat SA, Alekhina IA, Nirenberg HI (2002). Molecular, morphological and phylogenetic analysis of the Fusarium avenaceum / F. arthrosporioides / F. tricinctum species complex: A polyphasic approach. Mycol. Res. 106:655-669.
Crossref